Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0210 ATGAAAAACGGCAAGGGAGCAGTTGATGATCGAGTGGTTGGCAAGCGAAAGGCTGCTCTAAAGCCTGACACGAGCAGTGCAAAAATGACCAAGAAGGCGAGGAATGCCAAGAAAGATCCCAACAAACCAAAAAGACCGCCTAGTGCTTTTTTTGTTTTCCTTGAGGAGTTCAGAAAGACCTTTAAGGCAGAAAATCCTAATGTGAAGGCTGTATCAGCTGTGGGGAAGGCTGGAGGAGCGAAATGGAAATCTATGACTCCTGCTGAGAAAGCTCCATATGAAGCCAAGGCTGCAAAAAAGAAAGCTGAGTATGAAAAAGTCATGAATGCATATAATAACAAGCCGACAAACCCAGTCAATGACAGAGATGAGGAATCGGATAAGTCCAAGTCTGAAGTGCATGATGAAGAGGATGAAGCCAGTGGAGAGGAAGCACACCAAGAAGAGGAGGATGACGAAGACGAGGATGACGAAGAGGATGATGACTGA 489 0.456 MKNGKGAVDDRVVGKRKAALKPDTSSAKMTKKARNAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSAVGKAGGAKWKSMTPAEKAPYEAKAAKKKAEYEKVMNAYNNKPTNPVNDRDEESDKSKSEVHDEEDEASGEEAHQEEEDDEDEDDEEDDD 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0210 162 MobiDBLite consensus disorder prediction 74 162 - -
Acco09g0210 162 MobiDBLite consensus disorder prediction 1 47 - -
Acco09g0210 162 Gene3D High mobility group box domain 26 127 IPR036910 -
Acco09g0210 162 MobiDBLite consensus disorder prediction 93 107 - -
Acco09g0210 162 MobiDBLite consensus disorder prediction 1 44 - -
Acco09g0210 162 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 4 148 IPR031061 -
Acco09g0210 162 Pfam HMG (high mobility group) box 43 112 IPR009071 -
Acco09g0210 162 SUPERFAMILY HMG-box 29 115 IPR036910 -
Acco09g0210 162 Coils Coil 94 114 - -
Acco09g0210 162 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 43 112 IPR009071 -
Acco09g0210 162 MobiDBLite consensus disorder prediction 137 162 - -
Acco09g0210 162 MobiDBLite consensus disorder prediction 118 136 - -
Acco09g0210 162 SMART hmgende2 42 113 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0210 Acco-ChrAcco09 2444583 2446723 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Acco09g0210 HMG_box 5.3e-24 CL0114