LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco09g0208	ATGTTGGGAAGATCACGCGCTTTTCACTTTGAAGTGGATTATTTTCTTCTTTGCCAATCATTGTCGTTGCTGACTATGGTTGGCAATTGCTTTGGTGCCTTGATTTGTTGTAGAGGGACGAATGAACCTGCTGACCAGCCAGATGAACAAGTGATTGCAACTAAAACTTTTAGTTACAATTCAATGAGATCAGCAACAAGCGATTTTCATTTGTCTAGCAGAATTGGCGGTGGAGGTTATGGAGTTGTCTACAAGGGAGTTTTAAGAGATGGTACTCAAGTTGCTATCAAGTGTCTTTCTGTAGAGTCTAAACAAGGAACAAAGGAATTTATGACAGAAACTGATATTATATCAAAGATACAGCATCCAAACCTTGTGCAACTTATTGGCTGCTGTGTTGAGGGCTCCCATCGGATGTTGGTGTATGAGTTTTTGGAAAATAATAGCCTTCAATGTTCTTTGCTTGATTCTAAAAGCAAATGTGCTGCTCTGGATTGGCCAAAGAGGGCTGCTATCTGCTGTGGTACAGCTTGTGGTCTTGAATTTCTTCATGAAGAGGCTCAACCAAATGTTGTTCACAGAGATATCAAGGCTAGCAACATACTGCTTGATGGGGACTTTAATCCTAAAATAGGGGATTTTGGCCTTGCAAAGCTTTTTCCTGACAATGTCACTCATGTTAGTACCCGAGTGGCAGGAACTGTGGGATATCTAGCACCAGAATATGCACTTCTAGGACAACTTACAAAGAAGGCAGATGTGTACAGTTTCGGGATTCTTATGCTTGAAATAATCAGTGGTAAAAGTAGCAGTAAAGCCGCATTTGGAGATAATCTCTTTGTTCTAGTGGAATGGGCTTGGAAGCTGAGAGAAGAAGGCAGGCTTCTGGAAATTGTAGATCCGGAACTAACTGAATATGATGAGAAGCAGGTGTTGCGTTTCATCAAGGTTGCTCTGTTCTGTACCCAAGCAGCCGCACAACACAGACCCACCATGAAGCAAGTAATAAAAATGCTCACCAAGGAAGTCCATTTGAATGAGAGGGCACTAACTGAACCTGGAATTTACAGGTGGAATGGCTCCAAAGAGTACGGCAATTCGTCGGTGGAGGGGACATCATCTTCTCAAGCCAACAAGCATGGAAGTTCCAAATATCCGTACATGACATCAAGCCATTTTAGTGGTGCTGATTTGGATACACAGATACTTCCCAGGTGA	1218	0.4236	MLGRSRAFHFEVDYFLLCQSLSLLTMVGNCFGALICCRGTNEPADQPDEQVIATKTFSYNSMRSATSDFHLSSRIGGGGYGVVYKGVLRDGTQVAIKCLSVESKQGTKEFMTETDIISKIQHPNLVQLIGCCVEGSHRMLVYEFLENNSLQCSLLDSKSKCAALDWPKRAAICCGTACGLEFLHEEAQPNVVHRDIKASNILLDGDFNPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGILMLEIISGKSSSKAAFGDNLFVLVEWAWKLREEGRLLEIVDPELTEYDEKQVLRFIKVALFCTQAAAQHRPTMKQVIKMLTKEVHLNERALTEPGIYRWNGSKEYGNSSVEGTSSSQANKHGSSKYPYMTSSHFSGADLDTQILPR	405

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco09g0208	405	Gene3D	Phosphorylase Kinase; domain 1	40	144	-	-
	Acco09g0208	405	MobiDBLite	consensus disorder prediction	367	386	-	-
	Acco09g0208	405	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	145	351	-	-
	Acco09g0208	405	CDD	STKc_IRAK	88	341	-	-
	Acco09g0208	405	Pfam	Protein tyrosine and serine/threonine kinase	70	339	IPR001245	GO:0004672\|GO:0006468
	Acco09g0208	405	ProSiteProfiles	Protein kinase domain profile.	69	345	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco09g0208	405	ProSitePatterns	Protein kinases ATP-binding region signature.	75	97	IPR017441	GO:0005524
	Acco09g0208	405	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	38	376	-	-
	Acco09g0208	405	FunFam	serine/threonine-protein kinase PBS1-like	38	144	-	-
	Acco09g0208	405	Gene3D	Transferase(Phosphotransferase) domain 1	145	352	-	-
	Acco09g0208	405	SUPERFAMILY	Protein kinase-like (PK-like)	49	339	IPR011009	-
	Acco09g0208	405	SMART	serkin_6	69	339	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco09g0208	405	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	191	203	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco09g0208	Acco-ChrAcco09	2413381	2418050	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco09g0208	48	354	Receptor kinase-like Gene Family	AT1G56120	50.161	1.37e-104	327

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Acco09g0208		PK_Tyr_Ser-Thr	2.9e-46	CL0016