Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0186 ATGTATGCCTCAAAGCTCACCAGAGTAGAACAGAGGCCGACGGGAAGAAGGGAAAGAGAAGAAGGGTTTGAGGAGGCGATAGAGAGAAATCTGATAGTTTTTGAGATGGACGTGATCAAGTCTCAGCAAATTTCATCGAGGCCCGTCGAGAAGGTCATAGTGCACCCTCTGGTTCTTCTTAGCATAGTTGATCACTACAACCGGGTTGCCAAGGACACTCGCAAACGTGTGGTCGGCGTCTTGCTCGGTAGTTCATTTAAGGGCACCGTCGATGTTAGCAACAGCTTTGCAGTGCCATTTGAGGAAGATGACAAGGACACAAGCATCTGGTTCCTTGACCACAATTACCATGAATCCATGTTTTCTATGTTCAAGAGAATAAATGCCAAGGAGCATGTTGTGGGGTGGTATAGTACAGGCCCAAAGCTAAGAGAGAACGATCTTGACATTCACAGATTATTCCACAACTATGTTCCAAATCCTGTGCTGGTCATCATTGATGTCCAGCCCAAGGAGCTCGGGATACCTACAAAGGCTTATTATGATGTTGAAGAAGTAAAGGAGAATGCTACACAAAAGAGCCAGAAGGTTTTTGTTCATGTACCTTCAGAAATTGCTGCTCATGAGGTTGAGGAAATTGGAGTGGAACACTTGTTGAGAGATGTTAAAGATACGACCATCAGTACACTTGCCACTGAGGTTTCTGGTAAACTTACTGCGCTGAAAGGATTAGACGCTAGACTGAAAGAGATACGGGGTTACCTTGATCTGGTTATTGATGGAAAGCTTCCATTGAACCACGAGATACTTTACCATCTGCAGGATGTGTTCAACCTCATTCCTAATCTCAACGTGTCAGAGTTAATCAAGGCCTTTGCAGTGAAAACAAATGACATGATGTTGGTCATATATCTTTCTTCTCTGATCCGAAGCGTCATTGCACTTCACAACTTGATTAATAATAAGATGCTGAACAAAGAGCATGAGAAAGCTGAAGATGCAAAGCCAGTTACAATCCCTTCCGTCAGTGGAAGCTGA 1038 0.4393 MYASKLTRVEQRPTGRREREEGFEEAIERNLIVFEMDVIKSQQISSRPVEKVIVHPLVLLSIVDHYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSFAVPFEEDDKDTSIWFLDHNYHESMFSMFKRINAKEHVVGWYSTGPKLRENDLDIHRLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLATEVSGKLTALKGLDARLKEIRGYLDLVIDGKLPLNHEILYHLQDVFNLIPNLNVSELIKAFAVKTNDMMLVIYLSSLIRSVIALHNLINNKMLNKEHEKAEDAKPVTIPSVSGS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0186 345 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 46 328 - -
Acco09g0186 345 MobiDBLite consensus disorder prediction 1 21 - -
Acco09g0186 345 CDD MPN_RPN7_8 50 330 IPR033858 GO:0005838
Acco09g0186 345 SMART pad1_6 51 185 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco09g0186 345 Gene3D Cytidine Deaminase, domain 2 44 229 - -
Acco09g0186 345 ProSiteProfiles MPN domain profile. 52 186 IPR037518 -
Acco09g0186 345 Pfam Maintenance of mitochondrial structure and function 209 320 IPR024969 -
Acco09g0186 345 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 49 159 IPR000555 GO:0005515|GO:0008233|GO:0008237
Acco09g0186 345 FunFam 26S proteasome non-ATPase regulatory subunit 7 44 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0186 Acco-ChrAcco09 2090015 2097576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0186 54 283 Eukaryotic Initiation Factors Gene Family AT2G39990 28.632 3.03e-26 104