Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0175 ATGACAGCTGCTATGGACTTGAATGCCTCACCCGTTCCCGAGGAGGATGAGGACCCATTTGAGGGGCATTTAGAAGACTTCACCGCACAAGAAGAACGTGTAGAAACTGCAGTTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAAAGACGATTGAAAAGGGAGCGTCCAGATGACAGATCTGTTTATATATCTCCTTCACCTGGTTATGATCAGCTATTTCAAACGAAGTCTCTGAAATCATATGATCAAAGTAGGCTTCCTCCAGGGTGGTTGAATTGCCCTTCATTTGGTCAGGAAATTTTTTGCATGATACCTTCTAAGGTTCCACTTGGTGAATCGTTCAATGATTGTGTTGCTCCTGGCAAAAGATACTCATTCAAACAAGTGATACATCAACAAAGAGTTTTAGGGAGAAAACTTGGTTTGGTGATTGATTTGACAAATACTTCTCGGTATTATCCAGTGTCAGATCTAAAGAAAGAGGGTATCAAGCATGTAAAGATACAATGCAAGGGTCGTGGTTCTGTACCTGATGATTTATCTGTGAATCAGTTTGTCCATGAGGTTACACAATTTCTGTCACGTCAAAAACACTCAAAGAAATATATACTTGTCCATTGTACACATGGACATAATCGTACAGGATACATGATCATCCATTATCTTATGCGTGCCATATCAATGTCTGTCACACAGGCAATAAAAATATTTTCTGATGCACGCCCTCCTGGAATCTACAAACCTGATTACCTTGATGCCTTGTACACATTTTATCATGAAAAAAGGCCTGACATGGTGGTTTGTCCTCCTACTCCAGAGTGGAAGAGATCTTCTGAATTTGATCTTAATGGTGAGGCGGTTCCAGATGACGACGACGACGGAATGCCAGGCCCTCCTTTGGATGAGAACCATGAGACAGATGTATTGATGTCAAATGATGATGTCCTGGGAGATGAGATACCTAATGATCAGCAAGATTCATTCCGGCAATTCTGTTATCAATCACTTAAATTGGGTGCTGGGGCTAGGGGACACACACAATTTCCAGGATCACACCCAGTTTCTCTGAACAGGGAAAATTTGCAGTTGTTACGGCAGCGTTATTATTATGCAACATGGAAAGCTGATGGAACACGATATATGATGCTGATAACAATGGATGGTTGTTACTTAATTGATAGAAGTTTCAACTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGGGCACAAATGATGTGTTAGCGGAGAAGACCCACCACTACACATTACTTGATGGGGAGATGATTATTGATACTTTGCCTGATTCAAAGAAGCAGGAAAGGAGATACCTTATATATGATATGATAGCCATCAACCAAGTATCAGTAATAGAGCGACCTTTTTATGAAAGGTGGAAGATGCTTGAGAAAGAAGTGATTGAACCTAGGAATTGGGAGCGACATAATATATACCAGAGCAGAAACCCTTACTATAGATATGACATGGAACCATTCAGGGTGAGGAGAAAAGATTTTTGGTTGCTCTCTACAGTCACTAAGCTCTTAACAGAATTCATTCCAAAACTCTCTCATGCTGCTGACGGCCTCATATTTCAGGGCTGGGATGATCCTTATGTACCACGCACTCATGAAGGCCTCTTGAAGTGGAAATATCCTGAGATGAATTCTGTTGATTTCCTCTTTGAGGTTGATGATGATGGTGAGAAACTTTTTCTTTTCGAACGAGGAAAGAAGAAGCTCATGGAAGGGAATAGGGTGGCATTCAAAGATGGTTCAGATCCCTCGTTTCATTCTGGAAAGATCATAGAGTGCTCTTGGGACTCTGATAACCAGGAATGGGAATTCATGCGAGTGAGAACTGACAAATCAACTCCAAATGAGTTCAATACTTTCAAGAAGGTGATGCGAAGCATAAGAGACAATATTACGGAAGATGTTTTGTTGAACGAGATATCCGAGATTATTCGTCTTCCCATGTATGCTGACAGGATAAGAATTGACAGTAAAGCACACCATCACACTAATGCGGCACGGAGAAGGTGA 2046 0.4145 MTAAMDLNASPVPEEDEDPFEGHLEDFTAQEERVETAVDIARREREERKRRLKRERPDDRSVYISPSPGYDQLFQTKSLKSYDQSRLPPGWLNCPSFGQEIFCMIPSKVPLGESFNDCVAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRGSVPDDLSVNQFVHEVTQFLSRQKHSKKYILVHCTHGHNRTGYMIIHYLMRAISMSVTQAIKIFSDARPPGIYKPDYLDALYTFYHEKRPDMVVCPPTPEWKRSSEFDLNGEAVPDDDDDGMPGPPLDENHETDVLMSNDDVLGDEIPNDQQDSFRQFCYQSLKLGAGARGHTQFPGSHPVSLNRENLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRSFNFRRVQMRFPCRGTNDVLAEKTHHYTLLDGEMIIDTLPDSKKQERRYLIYDMIAINQVSVIERPFYERWKMLEKEVIEPRNWERHNIYQSRNPYYRYDMEPFRVRRKDFWLLSTVTKLLTEFIPKLSHAADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEVDDDGEKLFLFERGKKKLMEGNRVAFKDGSDPSFHSGKIIECSWDSDNQEWEFMRVRTDKSTPNEFNTFKKVMRSIRDNITEDVLLNEISEIIRLPMYADRIRIDSKAHHHTNAARRR 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0175 681 MobiDBLite consensus disorder prediction 283 307 - -
Acco09g0175 681 Gene3D - 552 643 IPR012340 -
Acco09g0175 681 MobiDBLite consensus disorder prediction 1 20 - -
Acco09g0175 681 Pfam mRNA capping enzyme, C-terminal domain 556 649 IPR013846 -
Acco09g0175 681 PIRSF mRNA_capping_HCE 73 681 IPR017074 GO:0004484|GO:0006370|GO:0140818
Acco09g0175 681 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 184 253 IPR000387 GO:0016311|GO:0016791
Acco09g0175 681 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 277 IPR029021 -
Acco09g0175 681 ProSiteProfiles Dual specificity protein phosphatase domain profile. 114 265 IPR020422 GO:0006470|GO:0008138
Acco09g0175 681 SUPERFAMILY Nucleic acid-binding proteins 554 665 IPR012340 -
Acco09g0175 681 Coils Coil 24 44 - -
Acco09g0175 681 CDD Adenylation_mRNA_capping 342 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Acco09g0175 681 FunFam mRNA capping enzyme, putative 312 549 - -
Acco09g0175 681 Pfam Dual specificity phosphatase, catalytic domain 139 259 IPR000340 GO:0008138|GO:0016311
Acco09g0175 681 FunFam mRNA capping enzyme family protein 550 658 - -
Acco09g0175 681 Gene3D Protein tyrosine phosphatase superfamily 66 282 IPR029021 -
Acco09g0175 681 MobiDBLite consensus disorder prediction 31 61 - -
Acco09g0175 681 PANTHER MRNA-CAPPING ENZYME 82 663 - -
Acco09g0175 681 ProSitePatterns Tyrosine specific protein phosphatases active site. 206 216 IPR016130 GO:0016311|GO:0016791
Acco09g0175 681 Pfam mRNA capping enzyme, catalytic domain 353 551 IPR001339 GO:0004484|GO:0005524|GO:0006370
Acco09g0175 681 MobiDBLite consensus disorder prediction 31 69 - -
Acco09g0175 681 FunFam mRNA capping enzyme family protein 83 297 - -
Acco09g0175 681 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 312 552 - -
Acco09g0175 681 Gene3D DNA ligase/mRNA capping enzyme 312 551 - -
Acco09g0175 681 CDD RNA_5'-triphosphatase 90 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0175 Acco-ChrAcco09 1910423 1923743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0175 1 681 Protein tyrosine phosphatase (PTP) family AT3G09100 69.622 0.0 962