Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0148 ATGTCATCAATTAGACAGATTTCCCTTGTAGATTTGGAGCAGGCAAGCCATCGCAGTGACATGAGTGCCGAAGCTAGCATTTGTTTCTCTGATGCTGAAGAGGGTTCTTGCTATTCCCACTTCTATTCAACAAATGGTGGCTCATACGATGACTACAGCTTTGCTTGTGATTCTGATCCTGAGGTTATCGAGGGTGTTCCTGAGTCTGCAAGAGCTTCTTCTTCTTCTTCTGTCACTGAATGTTCAGTGGAGGTTGAGATTGAAAGTGGGGTTCCTGAAATTAAGGTGCATTTGGATGTTGTAGAGAAAGAGTGTAGGATTTGTCACATGGGTTTGGAAAGTGAAAGCCATGAATCTGGGGTTCCAATTGAATTGGGTTGTTCCTGTAAGGATGATCTTGCTTCTGCTCATAAACTCTGTGCTGAAACTTGGTTCAAGATTAAAGGGAACAGGACCTGTGAAATCTGTCACTCTGCGGCACGTAATGTATTTGCAGCTACAGAGGAGACGACCGAGAATTCAAGTGATAGCAACAACACCATCACATTATCAACACTCCCAGTGCCAGCTTCCCCAGAAACTCGAAGATTTTGGCAGGGCCGCGGCTTCCTGAATTTAATGCTTATTTGTATGGTTATAGCATTTGTCATATCATGGGCTTTTCACTTCCATTTTCATTCACCTTAG 687 0.4352 MSSIRQISLVDLEQASHRSDMSAEASICFSDAEEGSCYSHFYSTNGGSYDDYSFACDSDPEVIEGVPESARASSSSSVTECSVEVEIESGVPEIKVHLDVVEKECRICHMGLESESHESGVPIELGCSCKDDLASAHKLCAETWFKIKGNRTCEICHSAARNVFAATEETTENSSDSNNTITLSTLPVPASPETRRFWQGRGFLNLMLICMVIAFVISWAFHFHFHSP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0148 228 ProSiteProfiles Zinc finger RING-CH-type profile. 97 163 IPR011016 GO:0008270
Acco09g0148 228 PANTHER ZINC FINGER, RING-CH-TYPE 14 225 - -
Acco09g0148 228 Pfam RING-variant domain 105 156 IPR011016 GO:0008270
Acco09g0148 228 SUPERFAMILY RING/U-box 101 159 - -
Acco09g0148 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 168 IPR013083 -
Acco09g0148 228 SMART ringv_2 104 157 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0148 Acco-ChrAcco09 1674290 1677621 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0148 76 227 C3H Transcription Factor Family AT5G05830 56.494 3.61e-56 176