Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0146 ATGTATATGGGGTTCCGATTGAATTGGGCATGTTCTTGCAAGCATGATCTTGCTGCTGCCCATAAATTCTGTGCTGAAACCTGGTTTAGAAGTCAAGGGAACAGGACCTGTGAAATCTGTCACTCTGCGGCACGTAATGTATTTGCAGCTACAGAGGAGACGACCGAGAATTCAAGTGACAGCAACAACACCATCACATTATCAACACTCCCAGTGCCAGCTTCCCCAGAAACTCGAAGATTTTGGCAGGGCCGCGACTTCCTGAATTTAATGCTTATTTGTATGGTTATAGCATTTGTCATATCATGGGCTTTTCACTTCCATTTTCATTCACCTTAG 339 0.4425 MYMGFRLNWACSCKHDLAAAHKFCAETWFRSQGNRTCEICHSAARNVFAATEETTENSSDSNNTITLSTLPVPASPETRRFWQGRDFLNLMLICMVIAFVISWAFHFHFHSP 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0146 112 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 61 IPR013083 -
Acco09g0146 112 PANTHER ZINC FINGER, RING-CH-TYPE 11 109 - -
Acco09g0146 112 SMART ringv_2 3 41 IPR011016 GO:0008270
Acco09g0146 112 Pfam RING-variant domain 9 40 IPR011016 GO:0008270
Acco09g0146 112 ProSiteProfiles Zinc finger RING-CH-type profile. 1 47 IPR011016 GO:0008270
Acco09g0146 112 SUPERFAMILY RING/U-box 7 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0146 Acco-ChrAcco09 1666166 1667061 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0146 1 111 C3H Transcription Factor Family AT5G05830 50.442 4.46e-34 115