Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0140 ATGGAGGATCCTCTGCTCCCATATGTCAGTCCCAGGAAGAAGCCTCCGCCGCTATGCCCTTTACCGGAGCACGAGGAGGTCGTTGTTCCTCTTACCCCGTCCGCGATTAAGGACCTTCTTATCTTTGGTCCTTCTTCCCCAACAGGTTCTACCCCCTTGCTTGAGGCTTTAACACTTACCCTGAACTCCCCAAAGCCCTCCTCTTCTTCAGAGGACCCTCAAGATACACAGCCCCAACAGTCTTGGCTTACTGACCCCAATTACCCAAGTCACAAAACTAATCTTCATCGCTCCAGAACTGCCCCGGCTTTGGCGGTAATCAAAGGTGTTCATCACCAGAGTCCTGTTGCTAGACCCCAATTTGGGTCCCAATCGATTGTTCGTCAAGCTTTTATTTTTCTTATGTTGTATTTGTCATTGGGGGTGGTTATTTATTGGTTGAATCGTCATCATTTTTCAGCAACTGAGACTCATCCTGTTGTGGACGCTTTATATTTTTGTGTAGTGACTATGTGTACGATAGGCTATGGTGATATTACTCCAAATAGTATAGCGACAAAACTGTTTTCCATATTGTTTGTACTGGTGGGTTTTGGGTTTATTGACATACTGCTTAGTGGGATGGTCAGTTATGTTCTTGATTTACAAGAGAATCACCTGCTCCAAGCGGTGAAGACCAAGGTTGAAATTGAGAAGGATGCCAGATCATATATAATTGATGTGAAGAAAGGGAGAATGAGGATTAGGTTGAAGGTGGCTTTGGCATTGGGGGTTGTCGTCCTTTGTATCGGAATTGGTTTTGGGTTTCTGCATTTTGTGGAAGGGCTTGGATTGTTGGATTCTTTTTATCTTTCAGTTATGTCGGTAACAACTGTTGGGTATGGTGACCATGCGTTCAAGACATTGGCTGGTCGGACCTTTGCTGCAGTATGGTTGCTTGTATCAACGCTTGCAGTGGCCCGGGCATTCCTGTATTTGGCCGAAGCAAGAGTGGATAAGCGGCATAGGAAGATGGCAAAGTGGATTCTCGGTCAAGATATGACTGTCTCTGAGTTTCTTGCTGCAGATATAGACAATAACGGCTTTGTGAGTAAATCAGAATATGTTATTTACAAGCTCAAGGAGATGGGGAAAATTTCAGATAAAGACATTTCGCAGATTAGTGAGAAATTTGATAGAATAGATGTCGGCAACTGTGGAAAAATAACTCTAGCTGATCTTATGGGGCCTCAAAATTGA 1239 0.4415 MEDPLLPYVSPRKKPPPLCPLPEHEEVVVPLTPSAIKDLLIFGPSSPTGSTPLLEALTLTLNSPKPSSSSEDPQDTQPQQSWLTDPNYPSHKTNLHRSRTAPALAVIKGVHHQSPVARPQFGSQSIVRQAFIFLMLYLSLGVVIYWLNRHHFSATETHPVVDALYFCVVTMCTIGYGDITPNSIATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHLLQAVKTKVEIEKDARSYIIDVKKGRMRIRLKVALALGVVVLCIGIGFGFLHFVEGLGLLDSFYLSVMSVTTVGYGDHAFKTLAGRTFAAVWLLVSTLAVARAFLYLAEARVDKRHRKMAKWILGQDMTVSEFLAADIDNNGFVSKSEYVIYKLKEMGKISDKDISQISEKFDRIDVGNCGKITLADLMGPQN 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0140 412 FunFam Two-pore potassium channel 5 115 225 - -
Acco09g0140 412 Pfam Ion channel 258 327 IPR013099 -
Acco09g0140 412 Pfam Ion channel 132 212 IPR013099 -
Acco09g0140 412 SUPERFAMILY EF-hand 343 407 IPR011992 -
Acco09g0140 412 Gene3D - 124 226 - -
Acco09g0140 412 SUPERFAMILY Voltage-gated potassium channels 123 212 - -
Acco09g0140 412 Gene3D - 324 409 - -
Acco09g0140 412 Gene3D - 251 323 - -
Acco09g0140 412 MobiDBLite consensus disorder prediction 61 94 - -
Acco09g0140 412 PRINTS Two pore domain K+ channel signature 169 197 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco09g0140 412 PRINTS Two pore domain K+ channel signature 290 299 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco09g0140 412 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 159 386 IPR003280 GO:0005267|GO:0016020|GO:0071805
Acco09g0140 412 FunFam Two-pore potassium channel 3 235 349 - -
Acco09g0140 412 ProSitePatterns EF-hand calcium-binding domain. 356 368 IPR018247 -
Acco09g0140 412 SUPERFAMILY Voltage-gated potassium channels 242 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0140 Acco-ChrAcco09 1587013 1592170 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0140 3 408 Ion Channels AT4G18160 62.937 5.46e-179 504