Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0123 ATGGAGGAGGGTTTTGAGCCTTACCATGTTCCTCAGCAAAGCAGGAGAGACAAACTCAGGGTTGGATTTCATCACAACCAACACTCTTCCCTCCCCACCACGGCGGCGTGCGGCGGTTTACTCCCGGCGGTCTCCGACCCTTCCCTTATTCCCTCCGATCTACTAACGTGCGCCAACAATAATCCTCAATCTTCAAATTTGCAAATAGACCCCGCAACTGTTCAAATTATCAACAACAACCCTTTTCTTAACTTTCCTCTCGCTCAAACCCTTCGCGCCGAGCCATTGTCTTTATCTCTCTACACTCCGCAAGCCAATCTTAACAGTAATCCCCCACTTGAGCTGAATCTTCAGAGATATGATGGCGGCGGCGGTTCTGTAAATAACATCCCGGCCGCCAACAACACCGTTTTGAGAAGCTCCGTCGTCGTGCCGGTGGGGCCCTTTACTGGTTACGCTTCCGTGTTGAAGGGATCGAGGTTTCTGAAGCCTGCTCAACAGTTATTGGAGGAGCTTTGCGACGTTGGGGGTCGTGAAATTTGTGCTGCAGGAAAGTTGACGGCGGACGCTTCGTTGATGGAGCCTGCTCCGTCGTCAGAGAGCCTCGGCTCCGGCGATCCACCGCAGCCGGCGCTTGGAGATGGCGGTGGGGAGGGTGGGAAGAAAAAGTCGAGACTGTTAACCATGCTTGATGAGGTGTACAGAAGGTACAGGCAGTACTATCAACAGATACAAGCAGTAGTGACTTCATTTGAGTATGTTTCAGGCCTTGGTAACGCAGCTCCTTATGCAATCTTGGCGATAAATGCCATGACCAAGCATTTCAAATGCTTGAAGACTATGATCATGGACCAGCTTCAGTTCACTAACAAGTCTCATTTTCACAATATGAGCAACAAAAAAGATGAATCTCCAAGGTTTGGAAATGTTGACCATAGAGTAGCAGGACCTTACTGCCAAATTAGGGATACTCAAAACCCTGAATTATTAGGGAACCAACCGATCTGGAGACCTCAACGAGGACTCCCTGAGCGTGCAGTGACCGTTCTTCGGGGTTGGCTGTTTGAACACTTTCTTCACCCATATCCTACTGATACGGACAAGCTGATGCTGGCGAGACAGACCGGTCTGTCTCGTAGCCAGGTATCAAACTGGTTCATCAACGCGAGAGTAAGGTTGTGGAAACCTATGGTTGAAGAAATACACACGCTAGAAACAAGAATGTCTCAAAAGAATCATCAGAACACCGAAGATCACAACAAGAACAAGCCCAGCACAAGTGACAAGTTTCAACAAGATGACGCTCCTTTTAAACGCACCAGAAATTATGAACCTACTACTCATCATGATATGTCTGCATCAGTGCCCAATCATCAGCTGCCATGTAATGCAATAAGCAGTGTCAATAATAGTAATCAGCCAGTGAGTGTTGGAGCCATGGCAAATAGCGTGTCGCTCACACTGGGTCTCCACCAGAACAACGGTGGGCTTGCTCTATCTGAACCTTTTCCCATGAGTGAAGCTCTCCGTTTTGGGCTTGCCCTAGAAGTACCCAGTAACGAAGAGTATGTAATGAGTGGTTCTGAATCGCAGAATCGGCATTATGGAAGAGACCATCAGGTGATTGGAGGGCAACTTGTGCATGATTTTGTTGGCTAA 1659 0.4834 MEEGFEPYHVPQQSRRDKLRVGFHHNQHSSLPTTAACGGLLPAVSDPSLIPSDLLTCANNNPQSSNLQIDPATVQIINNNPFLNFPLAQTLRAEPLSLSLYTPQANLNSNPPLELNLQRYDGGGGSVNNIPAANNTVLRSSVVVPVGPFTGYASVLKGSRFLKPAQQLLEELCDVGGREICAAGKLTADASLMEPAPSSESLGSGDPPQPALGDGGGEGGKKKSRLLTMLDEVYRRYRQYYQQIQAVVTSFEYVSGLGNAAPYAILAINAMTKHFKCLKTMIMDQLQFTNKSHFHNMSNKKDESPRFGNVDHRVAGPYCQIRDTQNPELLGNQPIWRPQRGLPERAVTVLRGWLFEHFLHPYPTDTDKLMLARQTGLSRSQVSNWFINARVRLWKPMVEEIHTLETRMSQKNHQNTEDHNKNKPSTSDKFQQDDAPFKRTRNYEPTTHHDMSASVPNHQLPCNAISSVNNSNQPVSVGAMANSVSLTLGLHQNNGGLALSEPFPMSEALRFGLALEVPSNEEYVMSGSESQNRHYGRDHQVIGGQLVHDFVG 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0123 552 SMART prehox3 150 284 IPR006563 -
Acco09g0123 552 MobiDBLite consensus disorder prediction 406 446 - -
Acco09g0123 552 SMART HOX_1 336 400 IPR001356 GO:0003677
Acco09g0123 552 Pfam Associated with HOX 155 282 IPR006563 -
Acco09g0123 552 Gene3D - 339 401 - -
Acco09g0123 552 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 65 419 - -
Acco09g0123 552 SUPERFAMILY Homeodomain-like 338 403 IPR009057 -
Acco09g0123 552 CDD homeodomain 336 397 IPR001356 GO:0003677
Acco09g0123 552 ProSiteProfiles 'Homeobox' domain profile. 355 396 IPR001356 GO:0003677
Acco09g0123 552 MobiDBLite consensus disorder prediction 406 455 - -
Acco09g0123 552 MobiDBLite consensus disorder prediction 194 222 - -
Acco09g0123 552 FunFam BEL1-like homeodomain protein 9 339 401 - -
Acco09g0123 552 Pfam Homeobox KN domain 353 392 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0123 Acco-ChrAcco09 1329751 1334880 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0123 1 552 Homeobox Transcription Factor Family AT5G02030 40.954 1.45e-104 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Acco09g0123 POX 1.5e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0123 09 1329751 1334880 Acco09g0123 09 1329751 1334880 ECH