Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0116 ATGGCTCAGTCGTCGGGTCGGGGTGATTTGGTGGGAGAATACATCATCGGGAAGAGACTTGGGTCCGGGTCTTTCTCGGTGGTATGGTATGGGAGGCACCGAGTCCATGGAACTGAGGTTGCCATTAAAGAGATCGCCACCGATCGGCTTAACCAGAAGTTGCAGGAAAGTCTCATGTCTGAGATTTTTATCTTGAAGCGGATTAACCATCCTAATATAATTCGTTTGTACGATATAATTGAGGTTCCTGGGAAGATACATCTTGTGTTAGAGTACTGTAGAGGCGGTGATCTCTCTATGTATATACAACGCCATGGAAGAGTCCAAGAAGGAACTGCAAAGTATTTTATGCAGCAGCTAGCTGCTGGCCTACAAGTTCTTCGAGATAATAATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTCCTCACCAGAAAGGATGACAAGTCAGATCTGAAGATTGCTGATTTTGGATTTGCAAGATCTCTGCAACCTAGGGGTCTTGCAGAAACCATGTGTGGTTCACCTCTCTACATGGCTCCAGAAATTATGCAACTACAGAAGTATGACGCCAAGGCAGACCTCTGGAGCGTGGGTGTGATCTTATTTCAGCTTGTTACAGGAAGGACACCATTTACTGGGAGTAATCAAATGCAGTTATTACAGAACATTATAAAATCAACTGAACTGCAGTTCCCATCTGATAATCAAATTCTGAGTTCTGAGTGTAAAGATTTATGTCAGAAATTGCTGCGACGTAGTCCAGTGGAACGGCTAACTTTTGAAGAATATTTTAATCATCCATTCCTTTGTCAGAAGCAACTAGAACAGGATAAATCATTGAGATGCGGAAGTTCTTCAAGGATGGTAGGTGGAATTTGCTTAACAGAGCCCAATCATTTGAGAAGGGCCAAAGAAAATCATCAAGAGGACTACTTACCTTTCTTTTTGGATGATGATTCTTGTCCTGGGGGAAGCCCATCTTTTTCAAGGAAGACATCCTCAATAAAGTCTACTTATGGATTTGAACTTAATGCACAGAAAGATAGAGCAGGCTCTGCATTTGCTACTTCTAATAACGCAAATTTAACTCCCCGAAAGCAACCTGAAAACAGTGCTTTAAGGTTGGACAGCCATAGAACATCAGCAAGAAATCTCACTGATCCACTAGAATATCTAGAACAGAGATCAGCAAACAGTAGTTTAAGAGTTGCAGACTCACTAGAGAATATTGATCAAGATTATGTTCTTGTGTCTGGACCTCCTATGGATGTCTCATCATCTTCAGTGAGCGCACCAAAGCCAAGCCCTTTTCCATATAGATCAGGTGTTTCCCTACAGGAGTCTTCTAATGTAATTGATAGAGTAAGTTCTCCAATGCCAATAAGTGGCGCTGCTACCAGTAGCACATATCAAATTGGAAGTTTAGAAAGTCAGGACTCTGGTCCAGGGACTTCACATGCATCAATGGATACGGGAGACAAGCAGCCATCAGCTGACTGCATGACCAGGATAAAATCATTGCAACAGTGTGCATCCAGCATAACTGAAGTAGTTAATGAAAAGAGGGAAACTAGAAAGCTGCTGGAAGCATTCCCCGTTCAGCTTGTTATTCTTGCAATTTGGAAGCAAGCACTACACATATGCCATGCACAGGCTGCCTCTGCCATGGAAGGAAGTCCAAGTCAAGAAAGGTCTAGATGTAGGAGGAGCACCAACATGAAGCATGGCATTTCTGATTCAGAAGAATGCCTTGATGGAAATGTGCAAGGGCCAAAGGATATTCTATCTCAAATTGGAAGTGAATTTCTAAGGGAACTTGAGTTTGCTGAAAAACTTGCTAAGGATCTTGAGGGTGTTGATAGTGAAACAACGATGCCAGATGCAATGGAGACAATATTTCAGTCTGCTCTTGCTTTTGGGAGACGTGGGGCTGTAGAAGAGCTCATGGGTCAATTGGACAATGCAGTTGCAGTGTATTCAATAGCTGTCCAACTACTGATGTTCCTTATAGTGGAAGCTCCATCCCTCATTGTAAACCCTCCATTTTCACTGACTAACACGGATCGATACAGGCTTCGGTCTTACATCAATGATATAAACAACAGGAAAGACTATGTCAGGTCTCAGTTGCTGCTGAAACGTGATGAAGCCGAAGGTGGCCCCAAGAACAAGTTTTAG 2184 0.4267 MAQSSGRGDLVGEYIIGKRLGSGSFSVVWYGRHRVHGTEVAIKEIATDRLNQKLQESLMSEIFILKRINHPNIIRLYDIIEVPGKIHLVLEYCRGGDLSMYIQRHGRVQEGTAKYFMQQLAAGLQVLRDNNLIHRDLKPQNLLLTRKDDKSDLKIADFGFARSLQPRGLAETMCGSPLYMAPEIMQLQKYDAKADLWSVGVILFQLVTGRTPFTGSNQMQLLQNIIKSTELQFPSDNQILSSECKDLCQKLLRRSPVERLTFEEYFNHPFLCQKQLEQDKSLRCGSSSRMVGGICLTEPNHLRRAKENHQEDYLPFFLDDDSCPGGSPSFSRKTSSIKSTYGFELNAQKDRAGSAFATSNNANLTPRKQPENSALRLDSHRTSARNLTDPLEYLEQRSANSSLRVADSLENIDQDYVLVSGPPMDVSSSSVSAPKPSPFPYRSGVSLQESSNVIDRVSSPMPISGAATSSTYQIGSLESQDSGPGTSHASMDTGDKQPSADCMTRIKSLQQCASSITEVVNEKRETRKLLEAFPVQLVILAIWKQALHICHAQAASAMEGSPSQERSRCRRSTNMKHGISDSEECLDGNVQGPKDILSQIGSEFLRELEFAEKLAKDLEGVDSETTMPDAMETIFQSALAFGRRGAVEELMGQLDNAVAVYSIAVQLLMFLIVEAPSLIVNPPFSLTNTDRYRLRSYINDINNRKDYVRSQLLLKRDEAEGGPKNKF 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0116 727 FunFam Aurora kinase A 8 96 - -
Acco09g0116 727 MobiDBLite consensus disorder prediction 475 494 - -
Acco09g0116 727 FunFam Serine/threonine-protein kinase ATG1 6 312 - -
Acco09g0116 727 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0116 727 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Acco09g0116 727 Gene3D Transferase(Phosphotransferase) domain 1 6 313 - -
Acco09g0116 727 CDD STKc_ATG1_ULK_like 20 270 - -
Acco09g0116 727 SUPERFAMILY Protein kinase-like (PK-like) 11 272 IPR011009 -
Acco09g0116 727 MobiDBLite consensus disorder prediction 475 500 - -
Acco09g0116 727 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0116 727 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0116 727 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 638 IPR045269 GO:0004674|GO:0006914
Acco09g0116 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Acco09g0116 727 MobiDBLite consensus disorder prediction 358 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0116 Acco-ChrAcco09 1198417 1207137 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0116 4 280 CBL-interacting serine-threonine protein kinases AT2G30360 36.237 4.98e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Acco09g0116 Pkinase 1.9e-73 CL0016