Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0093 ATGGAAAAAGAAGGTCAATGTTGGATTTGGACAAAGAGAAAGCACTCATCTTTGAGCTCTTATCATAATAGTACTCTTTCTTCGCCGACAACTCACAAGTTTAGCTATGGTGATTCATGGGAGGAACAAGCTTTTGCAGAAGATGAGCGCCTTGGTGGCTGTATTTGGCCTCCAAGATCATATTCTTGCAGCTTTTGTAACAGAGAGTTCAGGTCAGCTCAAGCTCTTGGCGGCCACATGAATGTTCACAGAAGAGATAGAGCTAGACTAAAGCAACCCCCAAGTCCACACAAACAAGATGAAACCACTACTCTTGATCATCATCATCAAAATTCGTTCTCATCTTCTTGTCTGCCTTGTTCCAACGCTAACCCTAATTCGGATCATGATCATCTTGAGGCTAAATTAGCCTATCCTTCTCTGATTATTCAAGAGAATTCTTCCCCACTGTACGATTCTTGTATTTCGTGGTCAAACTTTGCTAAACAAAGATTATATTCTCGAAAGGTCGATCTTACTGGAACTGAAGATAAGATCTCCAAGATAATAGATACTGATGATTATCACAAGGATGAAGCGGGTATTACGAGCTACAAGAGGAGAAGAATAATAGATGTTTCATCATCAATTATTCCAGTTGGTAATCGGAAAGATAATATGATCAAGTCTCAGATGTTGGAGTTTGTTAGTCCTAGTTCCATTATTGAAGAGCTAGATCTGGAGCTAAGGCTTGGTCATAGTCCTCCCAAGGTATAG 756 0.4008 MEKEGQCWIWTKRKHSSLSSYHNSTLSSPTTHKFSYGDSWEEQAFAEDERLGGCIWPPRSYSCSFCNREFRSAQALGGHMNVHRRDRARLKQPPSPHKQDETTTLDHHHQNSFSSSCLPCSNANPNSDHDHLEAKLAYPSLIIQENSSPLYDSCISWSNFAKQRLYSRKVDLTGTEDKISKIIDTDDYHKDEAGITSYKRRRIIDVSSSIIPVGNRKDNMIKSQMLEFVSPSSIIEELDLELRLGHSPPKV 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0093 251 MobiDBLite consensus disorder prediction 82 110 - -
Acco09g0093 251 Pfam C2H2-type zinc finger 61 85 - -
Acco09g0093 251 SMART c2h2final6 61 83 IPR013087 -
Acco09g0093 251 PANTHER OS07G0101800 PROTEIN 36 248 - -
Acco09g0093 251 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Acco09g0093 251 Gene3D Classic Zinc Finger 58 116 - -
Acco09g0093 251 MobiDBLite consensus disorder prediction 82 107 - -
Acco09g0093 251 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
Acco09g0093 251 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0093 Acco-ChrAcco09 966280 967035 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0093 41 251 C2H2 Transcription Factor Family AT5G06070 37.445 2.15e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco09g0093 zf-C2H2_6 6.9e-07 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0093 09 966280 967035 Acco09g0093 09 966280 967035 ECH