Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0091 ATGGAATTTAATCGTCAAAGCTCAAAGAAGGTATCAGAACAAGTAAGATGGAGCCCAGAAGAATCTGGAGCCCGATCTTATACATGTACGTTTTGCAAGAGAGGATTTTCAAACGCTCAAGCCCTAGGAGGTCACATGAACATCCATAGAAGAGACAGAGCAAGGCTCAAACAATCATCTGAAGAAAACTTGCTTTCTCTGGACATCTCAATCAAGAACCCCAATAATAACAGTACATGTACTTCTGATGATGATGATGATCAGCCTCCTCCTAATTATAAGAAGCCTTCTAATTCAGAAGAGAAGGTTTCGTTTCAGTGGGATTCTTCTGAAACACTTCCAAATAATCCCTATTTTGCTGGGAATAATAATGAGGAGAACATTGAAATAGATCTTGAGCTTCGGTTAGGTCATCAACCACATGACGCCTCAACTTCGAGCACCAGAGAATTTTTTTAA 459 0.3965 MEFNRQSSKKVSEQVRWSPEESGARSYTCTFCKRGFSNAQALGGHMNIHRRDRARLKQSSEENLLSLDISIKNPNNNSTCTSDDDDDQPPPNYKKPSNSEEKVSFQWDSSETLPNNPYFAGNNNEENIEIDLELRLGHQPHDASTSSTREFF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0091 152 PANTHER OS07G0101800 PROTEIN 10 140 - -
Acco09g0091 152 Gene3D Classic Zinc Finger 4 84 - -
Acco09g0091 152 SMART c2h2final6 27 49 IPR013087 -
Acco09g0091 152 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Acco09g0091 152 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Acco09g0091 152 MobiDBLite consensus disorder prediction 10 24 - -
Acco09g0091 152 SUPERFAMILY beta-beta-alpha zinc fingers 23 53 IPR036236 -
Acco09g0091 152 MobiDBLite consensus disorder prediction 1 24 - -
Acco09g0091 152 MobiDBLite consensus disorder prediction 69 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0091 Acco-ChrAcco09 934550 935148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0091 24 137 C2H2 Transcription Factor Family AT3G09290 39.568 1.76e-21 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco09g0091 None None None