Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0070 ATGGTGTTGCTGAAGAATTTGAACTACAGTTTTAATGGCTATCAAGTGCCTGTCATTCCTAAAGCTTCGAGAACAACTAGGGGGAGGAGTACGGTCAGGAAGAAGAATGAGGACAATCAGATACAAGCTTTTGAAATATTGGCCAGTGTAGCTGGCAACTTTCTGCATGATAACGAAAACTTGAATGCTGAGAATGCTGTGGCTGGAAAGGATTCCATAGGTTTTGTTGGAATTAACATAAAGGATAAACAAGAGGAAGAAGCAGGGTCATTTAAGATTGATGATGGATGTTGCAGTGAGAATGCCTCTGACTCAGTCTCTAGTTTGGAAGGGAAGCGTAATGGCCAAAGGGTTGAAGGCTGTTCATCTTTTCTTGGTAATCGTCTTGAAGGCCGTGGACAAAATGTTTTTGAGAAGGAAGCAGATGGACTGATAAAAGAGAATTGTGTGAATGAGAACACTGTTCATGTTACTGGCAGCTCTGCTGAAGTGTCAAAACCTGACCACAGGGCTTCTAAACGGGAAAGTTCGGAAAATTCTTTTGAGAAGCCTTCATTGGAGGGCCTCATACATGGTTCCAGTGGTGGGAAATTATTTAATAGAGATGATGACGAAAACTTTGCTAGGTGTACTCAGCCAAGCTCTAAGAATAAGAATTCTGGCCCCCTGCCAGATATGGTTTTTCAAAGTGTGAATAGTGTTTCTGCATCCAAAAGTCGTGATGTAGGCCAAAAGTCAAAGAATGGGAGTTTGTATGGAAGTGATGACAGTATTGGTAGAGACAATTATATACTTGAAAGCTCGCAGAGGATGTACCCTTTTAAGAAGAGGAAGTTCTTCAAACAGACCTCATTTTCTGCATCTGATAGGGGTTCTCACTGTCGTGGAAGATTTGATTCTTCTGACACCGGAGTTGATGATGTGAACTGCAGTGCAGCAATTGGAGCATCATCCTCTATAGCTGGTCAACAAGTGCATACCCGGTCAAGGGATTGTAATGTGAAGCTTAGCATAAAATCTTTTAAAGTCCCAGAGCTTTTTATTGATATCCCTGAAACTGCAACTATTGGTTCATTAAAGAGGACAGTTATGGAGGCAGTGACAGCTATTTTAGGAGATGAACTGCATGTAGGTATTCTTCTTCAGGGAAAGAAGGTTCAAGATGATAACAAAACTCTAATTCAGACCGGGATTTCTCAAGATGATAAACATCATAGATTGGGGTTCATGTTGGAGCCAAGACATACTAAAATTACACCACCATCATATAGTGAAGACCCTCCGTTCCGAACCACTAGTTTGCATCGGGATATATCCAGGAAACCTCCATCTTTGATGCTTCAACGAAGAACTTATAATGTCTCCCAAGAGCATTCCCTGATTAAGTTTGAAAGTTGTGGTGAAGGTGACCTAAACATGGTCCCTGCCCTAGCAGATACTTCTCATAACAATACCATGTCAAAATGCCGTGCTCTAGTTGCAGTTCCGGCTATTGACATGGAGGCATTAGCTGTCATTCCCTTCCGTCACAAGCCTCAGAATCCTGACTTTGTGCAGCGTCGAATCAGGAGGCCTTTCTCTGTTTCTGAAGTAGAAGCACTGGTTCAGGCAGTTGAAAAACTAGGAACTGGAAGATGGCGTGATGTCAAACAGTGTGCCTTTGACAATGCTAAGCACAGGACTTATGTGGATTTGAAGGACAAGTGGAAGACATTAGTGCACACTGCAAGAATCTCCCCTCAGCAAAGGAGAGGAGAACCTGTTCCTCAGGAGCTCTTGGACAGAGTCTTGGCTGCTCATGCCTATTGGTCTCAACAGCAATGTAAGCATCCAGTTAAGCCTCTTTGA 1848 0.4275 MVLLKNLNYSFNGYQVPVIPKASRTTRGRSTVRKKNEDNQIQAFEILASVAGNFLHDNENLNAENAVAGKDSIGFVGINIKDKQEEEAGSFKIDDGCCSENASDSVSSLEGKRNGQRVEGCSSFLGNRLEGRGQNVFEKEADGLIKENCVNENTVHVTGSSAEVSKPDHRASKRESSENSFEKPSLEGLIHGSSGGKLFNRDDDENFARCTQPSSKNKNSGPLPDMVFQSVNSVSASKSRDVGQKSKNGSLYGSDDSIGRDNYILESSQRMYPFKKRKFFKQTSFSASDRGSHCRGRFDSSDTGVDDVNCSAAIGASSSIAGQQVHTRSRDCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTAILGDELHVGILLQGKKVQDDNKTLIQTGISQDDKHHRLGFMLEPRHTKITPPSYSEDPPFRTTSLHRDISRKPPSLMLQRRTYNVSQEHSLIKFESCGEGDLNMVPALADTSHNNTMSKCRALVAVPAIDMEALAVIPFRHKPQNPDFVQRRIRRPFSVSEVEALVQAVEKLGTGRWRDVKQCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLAAHAYWSQQQCKHPVKPL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0070 615 MobiDBLite consensus disorder prediction 415 436 - -
Acco09g0070 615 CDD SANT_TRF 524 574 - -
Acco09g0070 615 SUPERFAMILY Homeodomain-like 524 605 IPR009057 -
Acco09g0070 615 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 519 577 IPR017930 -
Acco09g0070 615 MobiDBLite consensus disorder prediction 210 254 - -
Acco09g0070 615 Pfam Myb-like DNA-binding domain 523 572 IPR001005 -
Acco09g0070 615 SUPERFAMILY Ubiquitin-like 329 415 IPR029071 -
Acco09g0070 615 Gene3D - 513 614 - -
Acco09g0070 615 MobiDBLite consensus disorder prediction 158 254 - -
Acco09g0070 615 MobiDBLite consensus disorder prediction 166 181 - -
Acco09g0070 615 SMART sant 522 575 IPR001005 -
Acco09g0070 615 ProSiteProfiles Myb-like domain profile. 518 573 IPR001005 -
Acco09g0070 615 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 106 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0070 Acco-ChrAcco09 679920 683515 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g0070 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0070 09 679920 683515 Acco05g1446 05 30212273 30215666 ECH
Acco09g0070 09 679920 683515 Acco09g0070 09 679920 683515 ECH