Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0064 ATGGGTGCGTGCTGGAGCAACCGGATCAAGGCCGTGAGTCCTTCAAGTACAGGATTTATTTCAAGAAGTGTCAGCAGGGATGGCTGTGACACGGGCTCAAACAGCAGAAACTCATCGTCCTCCATACCCATAACTCCTCGGAGTGAGGGCGAGATCTTACAGTCTTCCAATTTGAAGAGCTTCAGCTACAGTGAACTTAGAACAGCCACAAGAAATTTTCGACCGGATAGTATCTTAGGAGAGGGTGGGTTTGGTTCAGTTTTTAAGGGGTGGATTGATGAGCACTCCTTTGTTGCCACCAAGCCAGGGGCTGGAATTGTTATTGCTGTGAAGAGACTTAACCAAGATGGTTTCCAGGGTCACAAGGAATGGCTGGCTGAAATCAACTACCTTGGTCAACTGCATCATCCTAATCTTGTTAAACTCATAGGGTACTGCCTGGAGGAAGAGCATCGACTTCTAGCATATGAATTTATGTCTAGGGGCAGTTTGGAGAATCATCTGTTCCGAAGAGGATCTCATTTTCAGCCATTCTCTTGGTCTTTGCGAATGAAAATAGCCCTTGGGGCTGCCAAGGGTCTTGCATTTCTCCATAGCAGACAACCTAAAGTCATATACCGTGACTTCAAGACATCAAATATTCTTCTTGATACAGATTATAATGCCAAACTTTCTGACTTTGGGTTGGCCAGAGATGGGCCAACTGGTGACAAGAGTCATGTCTCAACTAGAGTCATTGGTACTCATGGATATGCCGCGCCAGAATATGTTGCAACAGGCCACCTCACTGCCAAGAGTGATGTATATAGTTTTGGTGTAGTTCTCCTGGAAATGTTATCAGCAAAACGAGCAATAGACAAAAACCGGCCACCCGGAGAACATAAACTTGTAGAGTGGGCAAAACCTTATCTATCTAGTAAACGAAGGTCTTTTCATGTCATCGATGCCCGTCTTCAAGGTCAGTACTCACCAAGTCGAGCTCAAAGGGCAGCAGCCCTTGCTTTTCAGTGTCTTTCTGCAGAACCTAAATTCAGACCAAACATGGATGAGGTAGTAAGAGCATTGGAGCAGCTTCAGGAATCAAAGGACACATCAAAAATTGCTGATAAGAAAGAGCATTGTGTACAAAGCACCCATCATCCAAAGGGCTTACCTGCATCCACGAGAAACCGTGGCGGAGCTGTGCCATCGGATGCTGCTTATCCCAGGCCATCTGCTTCTCCCCTTTTTGCTTAA 1236 0.4595 MGACWSNRIKAVSPSSTGFISRSVSRDGCDTGSNSRNSSSSIPITPRSEGEILQSSNLKSFSYSELRTATRNFRPDSILGEGGFGSVFKGWIDEHSFVATKPGAGIVIAVKRLNQDGFQGHKEWLAEINYLGQLHHPNLVKLIGYCLEEEHRLLAYEFMSRGSLENHLFRRGSHFQPFSWSLRMKIALGAAKGLAFLHSRQPKVIYRDFKTSNILLDTDYNAKLSDFGLARDGPTGDKSHVSTRVIGTHGYAAPEYVATGHLTAKSDVYSFGVVLLEMLSAKRAIDKNRPPGEHKLVEWAKPYLSSKRRSFHVIDARLQGQYSPSRAQRAAALAFQCLSAEPKFRPNMDEVVRALEQLQESKDTSKIADKKEHCVQSTHHPKGLPASTRNRGGAVPSDAAYPRPSASPLFA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0064 411 ProSiteProfiles Protein kinase domain profile. 73 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0064 411 MobiDBLite consensus disorder prediction 18 47 - -
Acco09g0064 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Acco09g0064 411 Gene3D Phosphorylase Kinase; domain 1 48 158 - -
Acco09g0064 411 MobiDBLite consensus disorder prediction 361 378 - -
Acco09g0064 411 PANTHER OS01G0588500 PROTEIN-RELATED 40 359 - -
Acco09g0064 411 SUPERFAMILY Protein kinase-like (PK-like) 38 355 IPR011009 -
Acco09g0064 411 FunFam Serine/threonine-protein kinase BIK1 39 158 - -
Acco09g0064 411 FunFam Probable serine/threonine-protein kinase PBL8 159 374 - -
Acco09g0064 411 CDD STKc_IRAK 79 358 - -
Acco09g0064 411 ProSitePatterns Protein kinases ATP-binding region signature. 79 111 IPR017441 GO:0005524
Acco09g0064 411 Gene3D Transferase(Phosphotransferase) domain 1 159 382 - -
Acco09g0064 411 MobiDBLite consensus disorder prediction 361 411 - -
Acco09g0064 411 Pfam Protein tyrosine and serine/threonine kinase 77 355 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0064 Acco-ChrAcco09 630545 633249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0064 23 365 Glycoside Hydrolase AT3G07070 46.610 4.13e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco09g0064 PK_Tyr_Ser-Thr 9.8e-45 CL0016