Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0058 ATGGGTGATCCGTACCCTTTTGGGCTTCTCGATTTCCAGCAACTCATAGCAGGAAGAACCCACCATGATCATTTGCCGGAGCCGCCGTGTGTGGGCGGTGGTGGTGCCACTTCTGGTGCTGCTGCTCCACTCCTACCTAATAACTACAACGACGCCGTTTTCTCTCATGGCTTTGATACTACCACCTTCGCTGCTTCAAACCCTACTGTTACCACTGCTTCTGCTTTAGAAAAGGGATGGGCTGGATTTGATGATATGGGCAACAACAATAGATGGCCAAGACAAGAGACTCTTTTGCTCTTGGAGATCAGATCTCATCTTGATTCTAAGTTCAGAGAGACCAATCACAAAGCCCCCTTATGGAATCAAATTTCTAGGATAATGAGTGAAGAATATGGGTACCAGAGAAGTGGGAAAAAATGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAAGGGAAAGCAGGAAGACAAGATGGGAAACACTACAGATTCTTTCGTCAGCTCGAAGCAATATGTGGAGAATCATCATCTTCAACAACAACTAACAATATTACTACTACTTCTGCAAATTATTACCAACCTCCATCAATGACCTTCACATCAGATGGTGAACAGGTTCTTCATCACAACGACAACATCAATAAGTACTGCTCAAAGAGCCTCATCGGTCTGTCAAACAACTCATCATCAGATCATCAATTTGAGACATCCTCGTCTGAAAACAACAATGATGACATCAAGGACATGTCAGCAGTGACCTATATGATGATGAAGCAGAAACAGGAGGAGATGGACCAGAAAAGAGAGAGTGGAAAGAGGAAGAGGTTGAGAGTTGAGGTCGAAGAAATTGTGGAGTGTCACATGAAGAAGATGATAGAGAGTCAAGAGGCTTGGATGGAGAAGATTATGAGTGTGGTTGAGCAAAGAGAGCAAGAAATGGTGTATAAGGAAGAAGAGAGGATGAGAGATTCAATAAGATTCGATCCACAAGAAGTGCATCAGCTGTGGGCTAAAGAGAGAGCTTGGGTTGCAACAAGAGACGCTGCATTAATGGAGGTAGTGAAGAAACACTTGGGAAAAGAGCTAATAACAACTGATCATCTTTTTCATCAGCCAATGGTTGTTGAAGAATATGATGAAGAACCACAAAGCAAGAACAGTATGGTGGGTGGACAGAACTGGAGATCTCAAATCTGA 1215 0.4296 MGDPYPFGLLDFQQLIAGRTHHDHLPEPPCVGGGGATSGAAAPLLPNNYNDAVFSHGFDTTTFAASNPTVTTASALEKGWAGFDDMGNNNRWPRQETLLLLEIRSHLDSKFRETNHKAPLWNQISRIMSEEYGYQRSGKKCKEKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEAICGESSSSTTTNNITTTSANYYQPPSMTFTSDGEQVLHHNDNINKYCSKSLIGLSNNSSSDHQFETSSSENNNDDIKDMSAVTYMMMKQKQEEMDQKRESGKRKRLRVEVEEIVECHMKKMIESQEAWMEKIMSVVEQREQEMVYKEEERMRDSIRFDPQEVHQLWAKERAWVATRDAALMEVVKKHLGKELITTDHLFHQPMVVEEYDEEPQSKNSMVGGQNWRSQI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0058 404 CDD GT1 90 156 - -
Acco09g0058 404 MobiDBLite consensus disorder prediction 385 404 - -
Acco09g0058 404 ProSiteProfiles Myb-like domain profile. 88 149 IPR001005 -
Acco09g0058 404 FunFam trihelix transcription factor PTL-like 92 154 - -
Acco09g0058 404 MobiDBLite consensus disorder prediction 232 251 - -
Acco09g0058 404 PANTHER FI21293P1 79 366 - -
Acco09g0058 404 Gene3D - 92 154 - -
Acco09g0058 404 Pfam Myb/SANT-like DNA-binding domain 90 177 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0058 Acco-ChrAcco09 584935 587106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0058 91 369 Trihelix Transcription Factor Family AT5G03680 45.714 6.74e-71 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco09g0058 Myb_DNA-bind_4 8.7e-20 CL0123