Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0052 ATGGAAACCATGGCCACGCAAGTCAAGCTTACGCTAGTAAATTCCTCTATCAACGACTCATTTGAGGAGGTTTCTCTGTTTGCAATTTTGTTCCTGTGTTTTTCTAAGAGAACCAAGCTGCTCTCTGTTTCATCCCGTGGGAGATGCGTCGGAGACGAACAGAGTTTTTGCCAAGTTGTTAGAGTTTGTCTTGAATTCTTAAGACTGTTCTTGACTCCTTGCTTTCGGATGCGGGGATATCCTCCTGTTAAATTCAGAGCTTTCATTGGGGCAAGTGGGTCTAAAATTCTTGTATTTGATTTCCTCGCGAGAAATGGGCTGTGGGATTTGCACTTGGAAATGAAGGAGAGGCAACGTTGGAGAGCTGAGGAGGACGCATTATTACGTGCTTATGTCAAACAATATGGTCCTAGGGAATGGAATCTTGTGTCCCAGCGCATGAACACACCCCTTAACAGGGATGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCAAGCCTGGAATAAAGAAGGGATCTCTCACTGAAGAAGAACAACGACTTGTCATCCGACTTCAGGCGAAACACGGCAACAAATGGAAGAAAATTGCTGCAGAAGTCCCAGGTCGCACTGCTAAGAGGTTAGGTAAGTGGTGGGAAGTGTTTAAAGAGAAGCAGCAGAGGGAAAAGAAAGAGATCAATAAAACAGTTGACCCAATTGACGACACTAAGTACGATCATATACTTGAGACTTTTGCTGAGAAGCTGGTGAAAGAACGCCCTTCTCCATCCTACCTTATGGCTGCTTCCAATGGAGCTTTCATTCACACTGATGCATCAGCTCCTACGTCAGCTATGCTTCCTCCATGGCTTTCAAACTCAAATAACTCTACAACGATTCGGCCACCTTCCCCTTCTGTGACTCTAAGTCTCTCTTCCTCAACTGTAGCTGCACCACCTCCTTTTCAATGGTTACAACCTGAGAGAGCGCCAGAGAATGCTTCTCTTGTTATCGGGAACGTAACACCTCACGGAACTAATCCATCTTTTGGTGATAACATGCTAGTATCTGAGCTAATTGAGTGCTGTAAAGAGTTGGAAGAAGGGCATAGGGCATTGTCATCGCATAGGAAGGAAGCAGCATGGAGGTTAAGGCGTGTGGAGTTGCAGTTGGAGTCAGAGAAGGCGTGTCGGAGGCGGGAGAAGATGGAAGAGATTGAAATGAAGATTAAAGCTCTACGGGAAGAAGAGAAGGCTGCACTGGATAGAATTGAGGCCGAATACCGGGAGCAGCTAGCTGGACTGAGGAGAGATGCAGAAACCAAGGAGCAGAAGTTGGCAGAGCAGTGGGCTGCTAAGCACTCAAAGGTTAGTAAGTTTCTAGATCAGGTGGGGTGCAGAGCTAGGCTTGCTGAGCCAAGTGGAAGATAA 1413 0.4643 METMATQVKLTLVNSSINDSFEEVSLFAILFLCFSKRTKLLSVSSRGRCVGDEQSFCQVVRVCLEFLRLFLTPCFRMRGYPPVKFRAFIGASGSKILVFDFLARNGLWDLHLEMKERQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKEINKTVDPIDDTKYDHILETFAEKLVKERPSPSYLMAASNGAFIHTDASAPTSAMLPPWLSNSNNSTTIRPPSPSVTLSLSSSTVAAPPPFQWLQPERAPENASLVIGNVTPHGTNPSFGDNMLVSELIECCKELEEGHRALSSHRKEAAWRLRRVELQLESEKACRRREKMEEIEMKIKALREEEKAALDRIEAEYREQLAGLRRDAETKEQKLAEQWAAKHSKVSKFLDQVGCRARLAEPSGR 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0052 470 FunFam MYB-related transcription factor 117 171 - -
Acco09g0052 470 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 114 465 - -
Acco09g0052 470 CDD SANT 176 217 IPR001005 -
Acco09g0052 470 ProSiteProfiles Myb-like domain profile. 167 217 IPR001005 -
Acco09g0052 470 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 167 221 IPR017930 -
Acco09g0052 470 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 166 IPR017930 -
Acco09g0052 470 Coils Coil 397 439 - -
Acco09g0052 470 CDD SANT 119 166 IPR001005 -
Acco09g0052 470 Gene3D - 175 233 - -
Acco09g0052 470 Pfam Myb-like DNA-binding domain 120 181 - -
Acco09g0052 470 ProSiteProfiles Myb-like domain profile. 112 166 IPR001005 -
Acco09g0052 470 SUPERFAMILY Homeodomain-like 117 211 IPR009057 -
Acco09g0052 470 Gene3D - 117 171 - -
Acco09g0052 470 SMART sant 116 168 IPR001005 -
Acco09g0052 470 SMART sant 171 219 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0052 Acco-ChrAcco09 524316 528067 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0052 114 461 MYB Transcription Factor Family AT2G37630 67.397 1.79e-165 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco09g0052 Myb_DNA-bind_6 3.6e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0052 09 524316 528067 Acco09g0052 09 524316 528067 ECH