Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0050 ATGGCTGAATTGAAATCAGAGGAGTGTTGTCTAGAGAATAAGCAATCTACTGCTGCCTCTACCTCGTCTATCTCAGAAGGCAGTGCCAGTGCTATATACAAGTCCCCTGGAAGATGTAGCCCAGCATCAGCATCGCCCTCTCATCGGAGGACCACTGGCCCCATCAGGCGTGCAAAGGGTGGCTGGACTGCCCAGGAGGATGAGACATTGAGGAATGCTGTTGCAACTTTCAAGGGCAAGAGTTGGAAGAAAATAGCTCAATATTTTCCTGATAGATCAGAAGTGCAATGTCTGCACAGATGGCAGAAGGTTCTTAATCCTGAACTTGTTAAAGGCCCTTGGACTCTTGAGGAGGATGACAAAATTGTTGAACTGGTGTCAAAATATGGGCCAGCAAAATGGTCTATGATTGCCAAATCTTTGCCTGGTCGCATCGGGAAACAGTGTCGAGAGCGATGGCACAATCATCTTAATCCTGAAATAAAGAAGGATGCCTGGACTTTGGAGGAGGAACTGGCCCTCATGAATGCTCATCACATACATGGGAACAAGTGGGCTGAAATAGCTAAGGTTTTGCCTGGAAGGACTGATAATGCAATAAAGAACCACTGGAATAGTTCATTGAAGAAAAAATTAGAATTTTATTTAGCTACAGGAAACCTTCCGCCAATCCAAAAGAACAGTGCACAAGGTGGTGTGAAAGATTCAATAAGACTCTCTGCTAGTAAAACAGTACATGCTTGCTCAAATAAAGTAGTAGATGCAGCTGCTGATACATCATCAGAAAATACAGACAATACTAAAGGTGGCAGTGTAAAGAATCAACTAGAGTCCTTGGCAATAGTGAGAGAGTTTGGTAATTCTCTGAGCGTTCCTGCAAATGAAGGTGCTGATTCTGACTTTGTAGAATGGAAGCCTAGATCATCCAATCTAGATCTTAGTTACAGCAACTCAGAATCAGTGTCAAGGGATAATTTTGGATTGACCAGTGACCCAAAATTTGATAACACTGGACTGAATGGCAAGCATACGGTTGGGAATTTTGTGAATATTGGTGAAATGAGCAGTAGCAGGCTAATCGGTACATCTTTTTCACAGGATAGTCCACCCTCTGGTTCTTTGTGTTATGAGCCTCCATTGTTGGAGGGCTCAGTTCCTTTGGATTTCCTTTGTTTGAGTATGTATTGCCTGCAGAACGACTACAATGCTACTCCAGTGATGTCACCTGTTGGTTTCTTCACTCCAACTTGTGTGAAGGGTAGTGAAATATGCACAGAGACTCCTGAATCAATATTGAAAATGGCCGCTAAAACTTTCCCATATACGCCTTCCATATTGAGGAAGAGAAAGAATGGAGCCCAAACACATGGAACTCCTAATAAAGTTATGAAAGTGGATGATGGATTTCATACTTCTATTAAACAGGAGGAAACCAAGTATAATGCTAGTTCTGGGCATGGAGAGCTCTGTGAGACTCCTGCAAAGGATGACATTCTCGATAAGGCTTTCAATGCTTCTCCCCCTTACCGGTTAAGATTCAAGCGAAAAGCATTGGTCAAGTCTGTGGAGAAACAACTTGAGTTTGCTTTTGATAAAGAGAAGCATGATGGCCACAAGATAGAAAAATCTGCTAGGAGCAATGCAATGGCTGGAGATTGTTTACCTGAAACAAAAATGGCAGTGACGTAG 1689 0.4281 MAELKSEECCLENKQSTAASTSSISEGSASAIYKSPGRCSPASASPSHRRTTGPIRRAKGGWTAQEDETLRNAVATFKGKSWKKIAQYFPDRSEVQCLHRWQKVLNPELVKGPWTLEEDDKIVELVSKYGPAKWSMIAKSLPGRIGKQCRERWHNHLNPEIKKDAWTLEEELALMNAHHIHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLEFYLATGNLPPIQKNSAQGGVKDSIRLSASKTVHACSNKVVDAAADTSSENTDNTKGGSVKNQLESLAIVREFGNSLSVPANEGADSDFVEWKPRSSNLDLSYSNSESVSRDNFGLTSDPKFDNTGLNGKHTVGNFVNIGEMSSSRLIGTSFSQDSPPSGSLCYEPPLLEGSVPLDFLCLSMYCLQNDYNATPVMSPVGFFTPTCVKGSEICTETPESILKMAAKTFPYTPSILRKRKNGAQTHGTPNKVMKVDDGFHTSIKQEETKYNASSGHGELCETPAKDDILDKAFNASPPYRLRFKRKALVKSVEKQLEFAFDKEKHDGHKIEKSARSNAMAGDCLPETKMAVT 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0050 562 Gene3D - 111 162 - -
Acco09g0050 562 FunFam Transcriptional activator Myb isoform A 111 163 - -
Acco09g0050 562 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Acco09g0050 562 PANTHER MYB PROTEIN-RELATED 59 144 - -
Acco09g0050 562 CDD SANT 113 157 IPR001005 -
Acco09g0050 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Acco09g0050 562 SMART sant 162 210 IPR001005 -
Acco09g0050 562 SMART sant 58 107 IPR001005 -
Acco09g0050 562 SMART sant 110 159 IPR001005 -
Acco09g0050 562 MobiDBLite consensus disorder prediction 11 30 - -
Acco09g0050 562 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Acco09g0050 562 Gene3D - 164 234 - -
Acco09g0050 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Acco09g0050 562 FunFam Transcription factor MYB3R-2 164 228 - -
Acco09g0050 562 FunFam Transcriptional activator Myb isoform A 58 110 - -
Acco09g0050 562 Gene3D - 58 110 - -
Acco09g0050 562 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Acco09g0050 562 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Acco09g0050 562 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Acco09g0050 562 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Acco09g0050 562 CDD SANT 62 105 IPR001005 -
Acco09g0050 562 MobiDBLite consensus disorder prediction 1 55 - -
Acco09g0050 562 SUPERFAMILY Homeodomain-like 56 119 IPR009057 -
Acco09g0050 562 CDD SANT 165 208 IPR001005 -
Acco09g0050 562 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Acco09g0050 562 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0050 Acco-ChrAcco09 492470 497609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0050 2 552 MYB Transcription Factor Family AT3G09370 46.869 7.60e-147 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco09g0050 Myb_DNA-binding 2.6e-14 CL0123