Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0039 ATGGAACGCCAGAAAACAATGACAATGAATTGGAACGGTATCGACGACGACGACGAGGAGTCCTACTTCGAGAGCTTGGACGGCGCTTCGTCATCCGACGATGAGGAATTCCAAGAAAGCCGCATGTCATTCTCGGAAAATTCTCAGAGATTCAGAATCATGACAAGAAAAATGTCGACGGTACCAATGGCAGTGGCGATCCCTGACTTCGACTACGACATGTGGATGGAGGCACCGGGATCGATCACTGAACGGAGGAAGCGGCTGCTTTATGGAATGGGCCTATATGAGAACAAGGAGAGCTTGAGGCTGGCGAGCATAGGAATCGGCCGTGCAATGACGAGGAAGTTTGAGAACGATGCCGCGCCTCCGTCTCCTTCGCCCGATAAGCCCAAAGAGACGAAGGTTCCTGATCCTCTTGATGCAGCTGCGCCATGTGATCAGAATAAAACAGAGGCTGCTGATACTGCTGCATCATGTGATCAGCAAAAAACAGAGTCTGCACCACCGCCTCCAGATGAGCAAAAAACAGAGCAATTTTTCCCTGTTCCTGTTCCATTCGTCCTCGTCAGGTCGCGTTCCGACGGAGACGTAGATTCCGATGCCTATTCCTCGTCCAAAATGAGGAAGGAGGGACTCATAGGTAAGGTCTCAAAGCAGTGTCTGACGAGAACGTCATCAGAGATCATCCTCCCTCGTCCTCGTACGTGCCCCTACACATACTGGACCGCAGCGGCCAAAGACGACACCGCCGGTTCAGGGGATCAACAATCAAGCCGCCAGCACAGCCATAAACTAACCACGATCATCTCAAACACCAAATTCGCTTCTTTCTTCCTCATCAAGAATCTTGACAGCGGGAAAGAGTTCATCGTCACGGGGAAGGACTCGGGCAATGACGGCACATGGGGCAGTCTAAACGACATACAAACAGGGAAAAAATTAACGATGGAAGAGTTTGAAAAATCCATCGGACACTCCCCGATAGTTAAAGAGCTCATGCGACGAGGGAGAGACAAAAACGATGAGAGTAATAAGCCCGCGGGAGCAAAATACCTCCTGAACAAGAGCTTGAGAATGAGTAAGAAAACCGGGGCTGCTCTGTTGAAGAACATAATGGGTGTGGCAAATGGGTTCAAAGGAGAAAGAGAGAGGTCAAAGATCACTAAAGAACTACCGCCTCCTGCTAATTTGCCTCCTCTGCCTCCGTCTAAGCCACAACCGGCGAACACAGATCCGAATCAGAAACAGAGTAAGAACAACGAATGGGTCAGGGTTAGGCAGAGCGGGAAAACTCACAAAGAACTTTCAGCGTTACGCATGTGTCAAGAATTTCAGGCTCACGAGGGAGGTATTTGGATCATCAAGTTTAGTTGGGACGGCCATTATTTAGCGAGTGGCGGGGAGGATAAGGTGATTCATGTGTGGGAAGTGCAGGAGTGTGAGCTTATGTCGTTGACGTCGTCAGAAGAAAGCAATCTTACTCCGCTTCACCCTTCGCTGCTTGCTTCGTCGGCCACCAATGAAGACGCGGCGGCGGAGGAGGCTAAGAAGAAGGGCAAAGCTGGGTATAAAAAGTATGATAAGGTCCCGGACCACGTTCATGTGCCGGAGACTGTGTTCTCCCTCTCTGATAAACCTTTTTGCACTTTCAAAGGTCACTCCGAAGACGTTTTGGACTTGTCTTGGTCCAAATGTCAGTTACTTCTCTCGTCTTCAATGGATAAAACAGTGAGACTATGGAACTCGGAATTAAAGACGTGCTTGAAGGTGTTCACTCACAGTGACTATGTAACGTGCGTGCATTTTAATCCAATAGAGGAGGATTATTTCATAAGTGGGTCCCTGGATGCAAAGATTAGAATATGGAGCATTCCTCAACGATCAGTCGTGGATTGGGCCGACGTGCATGAAATGGTCACCGCCGTTTCTTACACTCCCGATGGTCAGGCTGCTCTTGTTGGTACACATAATGGCACTTGTAGTATGTATGGCACAGAAGATTGCAAATTAAGTCAGACAAGCACGATTGACTTACAACAGAGGAAGAAAGCTCAACAGAGAAAAATCACCGGTTTTCAGTTTGCACCCAGTAATCCATCAGAAGTGCTTGTCACTTCAGCTGACTCCAGGATTAAAATAGTAGAAGGATCCAAAGTTGTTCATAAGTTCCAAGGCTTCCGAAATCCAAACAGTCAAATAGCAGCTTCATTCAGTCCAAATGGGAGGCAAGTGATAAGTGCAAGCGAAGATTCTCAAGTATATGTGTGGAAGTATGAAGAGCCTCAACAAGGAGGCAACAATGCAAAAGCAAGACCTTTAGTAATGACCAGAGCTTTTGAGAGCTTCCACTGTAAGGATGTTTCAGTGGCAGCGCCATGGCCTTTCACCATAAAGGGTGATCCTCCTCAAGCCCCCACCAAGAAGAAAACTAGTCAACTTCCCCCTCTTCCCAAGAAGAAGGAACCCGATCCTTCCCCCGCCGTCGCCGACTATTCACCACCCAACGACTCCACCGTTATGACCACGACCACGCCTCTTCCTCCTAAGGAAAAGACCACTGACGACGCTGCTGAAACAAGTGATAACAACGTTAACGACAATATCAGCACGGCCACCACTAAAAGCGGTAATTCCAGTGACCAGCAAGAAGTGGACCCCGCAGCCATATCGCGAACAGAGTCTTTGGCTTCAGATTCGGCCACCACCTCCAGGAGGCATGATAATGGTCCATCCGCTATCTCTGCTACGAATGCGACGTCGTTGTCTTCGAGGTCTTCGTTGTCGTCCCGCTCACTCGCTGATAATAGTCAAGCCGCCGCATCATCAGGTTATCCTGTGGCATGGGGCTTGGTGATTGCGACGGCCAGCATTGGAGGCGAAATTAGGTGCTACCAGAATTTTGGTTTGCCTAAGAGGATCAGCAACGGCTTCTTTTGA 2940 0.4898 MERQKTMTMNWNGIDDDDEESYFESLDGASSSDDEEFQESRMSFSENSQRFRIMTRKMSTVPMAVAIPDFDYDMWMEAPGSITERRKRLLYGMGLYENKESLRLASIGIGRAMTRKFENDAAPPSPSPDKPKETKVPDPLDAAAPCDQNKTEAADTAASCDQQKTESAPPPPDEQKTEQFFPVPVPFVLVRSRSDGDVDSDAYSSSKMRKEGLIGKVSKQCLTRTSSEIILPRPRTCPYTYWTAAAKDDTAGSGDQQSSRQHSHKLTTIISNTKFASFFLIKNLDSGKEFIVTGKDSGNDGTWGSLNDIQTGKKLTMEEFEKSIGHSPIVKELMRRGRDKNDESNKPAGAKYLLNKSLRMSKKTGAALLKNIMGVANGFKGERERSKITKELPPPANLPPLPPSKPQPANTDPNQKQSKNNEWVRVRQSGKTHKELSALRMCQEFQAHEGGIWIIKFSWDGHYLASGGEDKVIHVWEVQECELMSLTSSEESNLTPLHPSLLASSATNEDAAAEEAKKKGKAGYKKYDKVPDHVHVPETVFSLSDKPFCTFKGHSEDVLDLSWSKCQLLLSSSMDKTVRLWNSELKTCLKVFTHSDYVTCVHFNPIEEDYFISGSLDAKIRIWSIPQRSVVDWADVHEMVTAVSYTPDGQAALVGTHNGTCSMYGTEDCKLSQTSTIDLQQRKKAQQRKITGFQFAPSNPSEVLVTSADSRIKIVEGSKVVHKFQGFRNPNSQIAASFSPNGRQVISASEDSQVYVWKYEEPQQGGNNAKARPLVMTRAFESFHCKDVSVAAPWPFTIKGDPPQAPTKKKTSQLPPLPKKKEPDPSPAVADYSPPNDSTVMTTTTPLPPKEKTTDDAAETSDNNVNDNISTATTKSGNSSDQQEVDPAAISRTESLASDSATTSRRHDNGPSAISATNATSLSSRSSLSSRSLADNSQAAASSGYPVAWGLVIATASIGGEIRCYQNFGLPKRISNGFF 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0039 979 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 551 582 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 832 850 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 152 172 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 859 925 - -
Acco09g0039 979 CDD WD40 443 758 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 410 425 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 1 44 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 13 33 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 390 429 - -
Acco09g0039 979 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 591 625 - -
Acco09g0039 979 PRINTS G protein beta WD-40 repeat signature 464 478 IPR020472 -
Acco09g0039 979 PRINTS G protein beta WD-40 repeat signature 569 583 IPR020472 -
Acco09g0039 979 PRINTS G protein beta WD-40 repeat signature 611 625 IPR020472 -
Acco09g0039 979 ProSiteProfiles Trp-Asp (WD) repeats profile. 445 486 IPR001680 GO:0005515
Acco09g0039 979 ProSiteProfiles Trp-Asp (WD) repeats profile. 737 760 IPR001680 GO:0005515
Acco09g0039 979 SUPERFAMILY WD40 repeat-like 440 762 IPR036322 GO:0005515
Acco09g0039 979 PANTHER WD REPEAT DOMAIN 44 16 971 IPR040324 -
Acco09g0039 979 Gene3D - 538 786 IPR015943 GO:0005515
Acco09g0039 979 ProSitePatterns Trp-Asp (WD) repeats signature. 464 478 IPR019775 -
Acco09g0039 979 Gene3D - 402 512 IPR015943 GO:0005515
Acco09g0039 979 ProSiteProfiles Trp-Asp (WD) repeats profile. 551 582 IPR001680 GO:0005515
Acco09g0039 979 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 445 479 - -
Acco09g0039 979 ProSiteProfiles Trp-Asp (WD) repeats profile. 591 625 IPR001680 GO:0005515
Acco09g0039 979 Pfam WD domain, G-beta repeat 587 624 IPR001680 GO:0005515
Acco09g0039 979 Pfam WD domain, G-beta repeat 443 476 IPR001680 GO:0005515
Acco09g0039 979 Pfam WD domain, G-beta repeat 721 758 IPR001680 GO:0005515
Acco09g0039 979 Pfam WD domain, G-beta repeat 547 582 IPR001680 GO:0005515
Acco09g0039 979 MobiDBLite consensus disorder prediction 798 925 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 118 179 - -
Acco09g0039 979 MobiDBLite consensus disorder prediction 393 409 - -
Acco09g0039 979 SMART WD40_4 717 758 IPR001680 GO:0005515
Acco09g0039 979 SMART WD40_4 438 477 IPR001680 GO:0005515
Acco09g0039 979 SMART WD40_4 585 624 IPR001680 GO:0005515
Acco09g0039 979 SMART WD40_4 676 716 IPR001680 GO:0005515
Acco09g0039 979 SMART WD40_4 627 665 IPR001680 GO:0005515
Acco09g0039 979 SMART WD40_4 544 582 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0039 Acco-ChrAcco09 395895 400295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0039 594 757 Miscellaneous Gene Families AT5G08390 22.485 4.86e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0039 09 395895 400295 Acco07g1803 07 34895674 34899323 CCT
Acco09g0039 09 395895 400295 Acco09g0039 09 395895 400295 ECH