Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0033 ATGCAAGGTGGTAATATAGCGATGAAGGAAGAAAATGGTTTGGATGTTAACGAAAGTGAGATGTGGCTTCAAGATGAACAAGAGCATCTTCTTGCTGTGAATGATGCCTCTATGTTCTATGCTGATTTCCCTCCTCTTCCAGATTTCCCTTGCATGTCATCCTCTTCCTCATCTTCCTCAACTCCACCACTTCAAGTCAACACCGCCACATCTTCATCCTCCGCCGAGAATAATCATCGGGTGAAGGAGCCGCCACTAGCAACCTTGGCCTCCACCGCTTCCACAGAGCTCCCTTTCCCGCCTGACAATTGTGCTGATGCCGAGATGGCGGATGAGCCATTTCCGTACTTGGACATGTTAGAGATCAACGATTTCTTCGACCCCACATTAGTTTTCCAAGATGAGGATTGCCCATTAGAGGAATATCCCCAGAATGAGATTGAGCGGCAGCAACCAGAGGATCAGGATCATCAACATGTGCTCTCTAATAATGACCATAATCATAACTGTGAACAAGAGATTCAAGGAAAAGAAGTAAACAACCCAGATGGGGAAATGAGCCATGTGTTCTTAGAGTGGCTCAAAACGAACAAGGATAGCGTGTCAGCGAATGACTTGAGGAGCGTCAAGCTCAAAAAATCAACCATAGAGTGTGCTGCTAAGCGCTTAGGAGGAGGAAAAGAAGCCATGAAACAGTTGTTGAAACTTATTCTTCAATGGGTTCAAACTAGCCATCTTCAAAACAAAAGGCGCTCTAATAATATTGTTAATAATAATAATAATAACGATGATGGTGCACCTCCAAATTTTGTCACAAACCCTAGCTCTAATTCCAACCCACATCTATTTGGAATACCTCAGTCATGTCCATGGGTTTCTCCTCCCCAGCCTTATGGGACAGATCCCGCGACTCTGGTACCTTCTTATCCATTAATCGGGTACCCGGGTGACCCGTATTCAAATGGAGCTCCGAATAATATCAATTCATACCAAATTGCTGGTAAAGAATATAACATGTTGGAAGCAGCTCATTCGTGGCCACCATCTCTGCTCACCGCTGCTGCCCACTGCAACCAGTCATATGGGAACAATAATAATGTTCACCAAGGTGGATTTGGCGGCTATGTGAATCACTATTCTTCATATCATTATTTTCATGGCGTGGCGGGGGGTGATGACCAGTTAATGGCGTTAGGTCCCTCGGCGACCAAAGAAGCGAGGAAGAAGAGGATGGCGAGGCAGAGAAGGTGTTTGACTCATCATAGGAGCCATAGCCAACAACAACAGAATCATGATGATAATAATGACCCACTTGCAAGGTTGGCAAGTGATTATACTTGCACCGGCGGTTCTGCGAATCCGGCTAATTGGGTGTACTGGGGATCACTGGCCGGAGGGGCAGCTTCCGTTGTTCCAGCTGAACCAACCCGGTCGGCTTTAGATGGGACTGCCATGCAAACGCAGAATTTTCAAACTAGAGTCCCGTCAACGGATCAAAGGCGTCATCAGGGATTGAAGACAGAGGAGAACTTGAAGTTTCTTCTTCAAAAGGTGTTGAAGCAAAGCGACGTTGGTAGCTTGGGGAGAATTGTGTTGCCAAAGAAAGAGGCAGAAACCCACTTGCCTGAATTAGAGGCGAGAGATGGCATTTCTATAGCAATGGAAGACATTGGAACCTCTCGAGTTTGGAACATGCGCTATAGATACTGGCCAAATAACAAAAGCAGGATGTATCTGCTGGAGAATACTGGGGATTTCGTGAAGGCCAATGGACTGCAAGAGGGGGACTTCATAGTGTTGTACTCAGATATCAAGTGTGGCAAATTTCTGATAAGAGGAGTGAAAGTAAGGCAAGCAGATCAGATGAAGAAAGCCAGAAAAACGCAGAAAAACTTGGCTACGGCCGCAATCGCGAATAAGGAGTCAAGCTCTCCAGCGTTACCATTGAAGAAATTTAGAAGAGAAATAAACTGA 1974 0.4564 MQGGNIAMKEENGLDVNESEMWLQDEQEHLLAVNDASMFYADFPPLPDFPCMSSSSSSSSTPPLQVNTATSSSSAENNHRVKEPPLATLASTASTELPFPPDNCADAEMADEPFPYLDMLEINDFFDPTLVFQDEDCPLEEYPQNEIERQQPEDQDHQHVLSNNDHNHNCEQEIQGKEVNNPDGEMSHVFLEWLKTNKDSVSANDLRSVKLKKSTIECAAKRLGGGKEAMKQLLKLILQWVQTSHLQNKRRSNNIVNNNNNNDDGAPPNFVTNPSSNSNPHLFGIPQSCPWVSPPQPYGTDPATLVPSYPLIGYPGDPYSNGAPNNINSYQIAGKEYNMLEAAHSWPPSLLTAAAHCNQSYGNNNNVHQGGFGGYVNHYSSYHYFHGVAGGDDQLMALGPSATKEARKKRMARQRRCLTHHRSHSQQQQNHDDNNDPLARLASDYTCTGGSANPANWVYWGSLAGGAASVVPAEPTRSALDGTAMQTQNFQTRVPSTDQRRHQGLKTEENLKFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGISIAMEDIGTSRVWNMRYRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVLYSDIKCGKFLIRGVKVRQADQMKKARKTQKNLATAAIANKESSSPALPLKKFRREIN 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0033 657 MobiDBLite consensus disorder prediction 414 438 - -
Acco09g0033 657 Gene3D - 511 632 IPR015300 -
Acco09g0033 657 MobiDBLite consensus disorder prediction 52 79 - -
Acco09g0033 657 SMART B3_2 515 615 IPR003340 GO:0003677
Acco09g0033 657 MobiDBLite consensus disorder prediction 52 80 - -
Acco09g0033 657 MobiDBLite consensus disorder prediction 249 277 - -
Acco09g0033 657 ProSiteProfiles B3 DNA-binding domain profile. 515 617 IPR003340 GO:0003677
Acco09g0033 657 Pfam B3 DNA binding domain 516 611 IPR003340 GO:0003677
Acco09g0033 657 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 182 629 IPR044800 GO:0003700
Acco09g0033 657 SUPERFAMILY DNA-binding pseudobarrel domain 514 611 IPR015300 -
Acco09g0033 657 CDD BfiI_C_EcoRII_N_B3 513 614 - -
Acco09g0033 657 FunFam B3 domain-containing transcription factor FUS3 511 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0033 Acco-ChrAcco09 351086 354002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0033 12 632 B3 DNA Binding Superfamily AT3G24650 41.501 2.01e-130 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco09g0033 B3 5.4e-18 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g0033 09 351086 354002 Acco09g0033 09 351086 354002 ECH