Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0029 ATGTGCTCAACGCTTCACCCTTCCCATAAGGTTACTAATTACTGTGTATGGTTTTCTTATGAAAATTCAATTTTTAGCGTTAACGCATGTAATTATTCTTATTCAGGAAGATTGATACTTATAATACGAGCATGTGTTGAATTTTACTTGATTTGTAAATCAGACAAGGTTTTGTTTCTGTCATCTTACTATCTACAAGTTGGGAACTATGGTGTTGCATATGACAACAAAGCAGTAATTGGTTGGGATGAATCAAATGTTATAGGAGTATTGTTTGGGAAACGCAAAATCTCTCTTATCTCTTCTTCTCTTCCCACTTCCCGAGCCCATACATACACCTCTCTCTATTTATTGCTCACATCACACAGTTCCATTGCAACAGCCTTGCCTACTCTGAATTGCCCTTTCTTCTCTTTTCCCTTCGCCTTGCTGCTCATTGACATGGAAGATGAGGAAGAAGTGGTCCGCAAGGTTGGAGGAGGAGAAGAATGCCGAGTTTTCCAATGTCAGTTCTGTTCAAGAAATTTTTACAGTTCTCAAGCTTTGGGAGGACACCAAAATGCCCACAAAAAAGAGAGAACAGCTGCTAGAAAGGCTAAAAGGGCAGCATCTGCGTACTCTTCTTTTGCTTCTTCTCTTGTGTCTCCAACAATGCCTTTTGGAGCCGCCACCCATCAAATGGCTCTTCTGAATCCTTCAATGTTCCTCGCTTCAAATCTTGCTTACGTCCAAAGGCACCAGATGGTTGACCATTTTGGAGCCAACGTTGGGCCTAGGAATGCTCTGTTTTGTGAACAAGTTGAGGAGAGAGGGTTGGGGAATTGGCGCAGCAACATGTCATTGACAAGAAGGGACGATCAGGGCATTGACATAGCGAATCATTGTAAAGAGAAAGATCAGAATCTTGATTTGACTCTTCATCTATAG 927 0.4153 MCSTLHPSHKVTNYCVWFSYENSIFSVNACNYSYSGRLILIIRACVEFYLICKSDKVLFLSSYYLQVGNYGVAYDNKAVIGWDESNVIGVLFGKRKISLISSSLPTSRAHTYTSLYLLLTSHSSIATALPTLNCPFFSFPFALLLIDMEDEEEVVRKVGGGEECRVFQCQFCSRNFYSSQALGGHQNAHKKERTAARKAKRAASAYSSFASSLVSPTMPFGAATHQMALLNPSMFLASNLAYVQRHQMVDHFGANVGPRNALFCEQVEERGLGNWRSNMSLTRRDDQGIDIANHCKEKDQNLDLTLHL 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0029 308 Gene3D Classic Zinc Finger 151 214 - -
Acco09g0029 308 ProSitePatterns Zinc finger C2H2 type domain signature. 169 189 IPR013087 -
Acco09g0029 308 PANTHER ZINC FINGER PROTEIN JAGGED 162 308 IPR045320 GO:0003700
Acco09g0029 308 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 194 IPR013087 -
Acco09g0029 308 SUPERFAMILY beta-beta-alpha zinc fingers 165 194 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0029 Acco-ChrAcco09 299350 306031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0029 143 220 C2H2 Transcription Factor Family AT5G25160 45.570 1.40e-16 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco09g0029 None None None