Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g0008 ATGAGTTGCTTTCCTTGTTTTTCATGCAATGACAAGAAAGCAGCACAGAAGAAGTCCAAACAAGGAATTTCAATTAGGGCACAAACTCAACTAGGTCAACCTCAAAAGGAAGCCCTGCTTCCTCAGGCCCGCCCTGAGAATAATCATTCTTCAAAGCCAACTGAGGGAAGACCAAATAATAATAGTAACGCAAAGAAAGATGGTGGCAATAACAATAACATCGCCGCCAAAAATTTCACCTTTCGAGAATTGGCCTCTGCCACAATGAATTTTCGGGGAGAATGCCTCATTGGTGAAGGTGGTTTCGGAAGAGTTTATAAGGGAAAACTCGATAAAACCAACCAGATGGTAGCCGTGAAGCAGCTGGATAGAAATGGATTGCAAGGGAATAGAGAATTCCTTGTGGAAGTGTTGATGTTAAGCCTCTTACACCATGAAAATCTGGTGAATCTCATTGGGTACTGTGCGGATGGAGATCAAAGATTATTGGTGTATGAGTACATGCCTTTGGGATCGCTAGAAGACCATCTTCTTGACCTGGAACCGCACGAGAGGCCATTAGATTGGGGTGTGCGGATGAAAATAGCTCTGGGGGCATCCAAAGGTGTAGAATATTTGCACGACAAGGCCAATCCTCCAGTCATATACCGAGACTTGAAGGCCTCAAACATATTGCTGGACAGGGGGTTTCATGCAAAGCTGTCGGATTTCGGGTTGGCCAAGCTGGGACCCACAGGAGACATGTCTCATGTCTCCTCCCGAATCATGGGAACCTACGGTTACTGTGCTCCTGAGTATCAACGAACTGGTCAGCTCACCGTCAAATCTGATGTCTACAGTTACGGTGTCGTTTTACTGGAACTCATCACTGGAAAGCGAGTGATTGACAACACCAGGCCTGCCCGCGAGCAAAATCTCGTTTCTTGGGCACGGCCAATCTTCAAGGATCCCAAGAGATGCCTACAGCTAGCCGATCCCCTTCTTCAAGGAAACTTCCCTGTCAGAGATTTCAACCAGGCCGTGGCTGTGGCCGCCATGTGTCTCCACGAGGAACCCTCCGCCCGCCCTTTTATCAGTGACGTCGTCACCGCCCTTACTTTTCTGGGCACAAACGACTCCGAAGCCTCCGACATTATTCCCCAGTCACCACCGCAACAACATTCCAACCTTCTTGACGACGACTCTGTTGCCCTATTACGTCAGCGAGCCGTTGCTGAAGCCATCAAATGGGGTTCAGCTTCTAGGACAAATGCAAATGCTTCCTCTTAG 1269 0.4823 MSCFPCFSCNDKKAAQKKSKQGISIRAQTQLGQPQKEALLPQARPENNHSSKPTEGRPNNNSNAKKDGGNNNNIAAKNFTFRELASATMNFRGECLIGEGGFGRVYKGKLDKTNQMVAVKQLDRNGLQGNREFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLEPHERPLDWGVRMKIALGASKGVEYLHDKANPPVIYRDLKASNILLDRGFHAKLSDFGLAKLGPTGDMSHVSSRIMGTYGYCAPEYQRTGQLTVKSDVYSYGVVLLELITGKRVIDNTRPAREQNLVSWARPIFKDPKRCLQLADPLLQGNFPVRDFNQAVAVAAMCLHEEPSARPFISDVVTALTFLGTNDSEASDIIPQSPPQQHSNLLDDDSVALLRQRAVAEAIKWGSASRTNANASS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g0008 422 FunFam Serine/threonine-protein kinase PBS1 64 167 - -
Acco09g0008 422 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Acco09g0008 422 MobiDBLite consensus disorder prediction 44 72 - -
Acco09g0008 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Acco09g0008 422 PANTHER OS07G0668900 PROTEIN 6 376 - -
Acco09g0008 422 ProSiteProfiles Protein kinase domain profile. 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0008 422 Gene3D Transferase(Phosphotransferase) domain 1 168 381 - -
Acco09g0008 422 CDD STKc_IRAK 97 366 - -
Acco09g0008 422 MobiDBLite consensus disorder prediction 15 72 - -
Acco09g0008 422 SMART serkin_6 91 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0008 422 MobiDBLite consensus disorder prediction 21 36 - -
Acco09g0008 422 FunFam Serine/threonine-protein kinase PBS1 168 382 - -
Acco09g0008 422 Gene3D Phosphorylase Kinase; domain 1 61 167 - -
Acco09g0008 422 Pfam Protein kinase domain 96 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g0008 422 SUPERFAMILY Protein kinase-like (PK-like) 77 391 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g0008 Acco-ChrAcco09 85158 87232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g0008 1 418 Glycoside Hydrolase AT3G07070 64.608 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco09g0008 Pkinase 1.7e-46 CL0016