Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2343 ATGGATGGGGTCAGCCCTGAGAATGAAGCGGAGCAATCTCAGTGCAGAGATTTGGGCGTTGCATCCTCATCTTCAGCTTCGACGGGGTTAGGATGGAGGCCCAGCCAGCATCTTGGGTTTACTCCATATATATGGTCGGGTGAAACTTCGGATAATTCCCAAACTCTGCGTGTTGTTGTGAGGAAATCCCTGCTGGCAAGATTGACCAAGGAAATAGTTGAAACATACCAAATATGCAATCCACAGTTCAAGTATTCTGAAGAGCTAAATCCAAAAAGATATTTGACCAGCCCATCTGTTGGAGTGCTTAATGATGGCTATGATAATGTTAACTCAGATCTTATTCTGACAGTGAACTATGTCTTGGTCAATTTAGAGAGAAATAGAAGATATCTTGTCAAAGATGTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAATGTTGGGTTTCAGATACTAACAGCTATGTTGCTGTGAAGATCATCAAAAATCAACCTGCATACTATCAACAGGCATTGGTTGAAGTATCTATTTTGAATACGTTAAACAAGAAGTATGATCCTGAGGACAAGCATCACATTGTTCGTATATATGATTACTTTGTATATCAACGGCATTTGTGCATATGCTTTGAACTTTTAGACACAAACTTGTACGAGCTTATCAAGTTGAACCATTTTAGGGGATTATCTCTGAGTATTGTTCAGCTGTTCTCTAAGCAGATATTACATGGACTGGCTCTATTAAAAGAGGCTGGCATCATTCATTGTGATCTGAAGCCAGAAAACATTCTTCTATGTACAAGTGTGAAGCCAGCAGAAGTCAAGATTATTGACTTTGGATCAGCATGCATGGAAGACCGTACAGTCTACTCCTATATTCAGAGTCGATATTATAGGTCTCCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCTGAATTGTTTCTTGGATTACCGTTATTTCCTGGTGCTTCTGAATTTGATCTTTTGAGGCGGATGATCGAAATACTTGGAGGACAACCGCCTGATTATGTACTGAGGGATGCCAAAAACACTACTAAATTTTTCAAGTGTATCGGGAGTATCCGGAATGGAGAGAACAGTGAGATTTCAACATATGGAAGAAGTTCTTATCAAGCATTGACTGAGGATGAATATGAAGCTAGAGAGTTGAAGAAGCCATCAATTGGGAAAGAGTATTTCAATCATATGAACCTTGAAGCAATTGTTATTAACTATCCCTATAGGAAAAACTTGCCGAAGGAAGATATTCTCAAAGAGAGTCAAATACGATTGGCATTAATTGATTTTTTGAGAGGGCTTGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTCCAGGCTTCAAGGCACCCTTTTGTGACAGGGGAACCTTTTACCCATCCGTATGAGCCTCCTCTGGAGACCCCTCGTGTGCCGGTTGTTCAAGCTGTCAAAGTGGATCATCACCCCGGTGGAGGGCACTGGTTTGCTGCTGGTCTATCTCCTAATGTACCTAACAAAAGTAGGCCATCACTATATAGCAGCTTGCATTTCCAGATGGTTCAGTATCCTCCTGCTAACAGCTATGGCAGTGTAGGAAGCCATGGTAGCTATAATGATAGTGTTGGGCTTGGAAGTAGCTACGGAAGTTATGGAGAAAGCAATAATATGTTTGCATACTATTCGCCTGTTGGTCCATCTGGTATTCATTTGCTTGGTCATGGGAGTATGTCGATGCTCGGAAATAGTCCTGATGCTAGGAGAAGAGTTATTCAATACCAGCCAGGGAATGGTCGAGGTATAAGCCCATCTGCTGGAACTTTCACCCATCTGCCCCTTGGTGCCAGTCCCTCGCAATTTACTCCTCCAAGTTCCTACACACAAGTTTCAGCAAGCTCTCCTGGACACTATGGACCTACTTCTCCTGCAAGAGGCACTTCTCATGGATCCCCACTGGGGAAGACATCAACAGTTAGCCAGTTTAATAGAAGAAAAAATTGGGGATGTTCTGGAAGCCCTCAAACTCAAGATATAACATTTTCTCCACATTGGCAAGGCCAATGTCCTGACAGCTCCATCCATGGTGAAGGAACAGCTCAAGTTCTTAGCAGCTCGCCCTCATATCTGCAATCAAATACTGATGCTGCAAGCTGGAAGCAGCGAGGAGTTGGAGCTAATCAGAAAATGGCATGCTTGTTTATGCCAAGTTCTAATTCAAACTTGCAATCAACAGAATTGGGACATGACAACCCAGAGTCTTGCTTATCATTGCCTGATCCTGGTGATTGGGATCCCAATTATAGTGATGAACTACTTCTGCAAGAGGATAGTTCAGATGGAAGCTGCCTGGCAACGGAGTTTGGCAGAAGTATGAATATTGGTTCCACAGAACCATTGGTTGGATTTGGAAGGTTCAACCATGCCTCCAGCTCCAGCGCAAGCCCTCCTATATCCATTCAGAGGCAAAATGGACCGGTTCAAGTGTATTCTAATGTAGAGATGGATAGCTCTCCAGCTTATGATGTGCAAGCTGGATACATGCGCTCGGTGTCTAAGCCTTTTCATCTCATACCTCGTATTTTGCAAAATTCTCCTAACCGTTTTGGTCTGCAACCTGTCCAAAGATTTGCCCATGGTAGACCCACTCAGTTCAGTGACTGGAATCAAATTAAGGCCCAGGCTCCTCCTTCCAGTTTCGGCAGTGGAGGCCCGCGTTCTCCAAGAAATAGCTCGTTTGCCAATAGTATGACATGGGGGCGTAGAGTTAATCCTCCTGTCTCAAACATTCCGCCTGCATCCTGTGCAAGAAAAGACTATGCATGA 2862 0.435 MDGVSPENEAEQSQCRDLGVASSSSASTGLGWRPSQHLGFTPYIWSGETSDNSQTLRVVVRKSLLARLTKEIVETYQICNPQFKYSEELNPKRYLTSPSVGVLNDGYDNVNSDLILTVNYVLVNLERNRRYLVKDVLGHGTFGQVAKCWVSDTNSYVAVKIIKNQPAYYQQALVEVSILNTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKLNHFRGLSLSIVQLFSKQILHGLALLKEAGIIHCDLKPENILLCTSVKPAEVKIIDFGSACMEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIEILGGQPPDYVLRDAKNTTKFFKCIGSIRNGENSEISTYGRSSYQALTEDEYEARELKKPSIGKEYFNHMNLEAIVINYPYRKNLPKEDILKESQIRLALIDFLRGLVEFDPAKRWSPFQASRHPFVTGEPFTHPYEPPLETPRVPVVQAVKVDHHPGGGHWFAAGLSPNVPNKSRPSLYSSLHFQMVQYPPANSYGSVGSHGSYNDSVGLGSSYGSYGESNNMFAYYSPVGPSGIHLLGHGSMSMLGNSPDARRRVIQYQPGNGRGISPSAGTFTHLPLGASPSQFTPPSSYTQVSASSPGHYGPTSPARGTSHGSPLGKTSTVSQFNRRKNWGCSGSPQTQDITFSPHWQGQCPDSSIHGEGTAQVLSSSPSYLQSNTDAASWKQRGVGANQKMACLFMPSSNSNLQSTELGHDNPESCLSLPDPGDWDPNYSDELLLQEDSSDGSCLATEFGRSMNIGSTEPLVGFGRFNHASSSSASPPISIQRQNGPVQVYSNVEMDSSPAYDVQAGYMRSVSKPFHLIPRILQNSPNRFGLQPVQRFAHGRPTQFSDWNQIKAQAPPSSFGSGGPRSPRNSSFANSMTWGRRVNPPVSNIPPASCARKDYA 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2343 953 MobiDBLite consensus disorder prediction 627 670 - -
Acco08g2343 953 CDD PKc_YAK1 131 473 - -
Acco08g2343 953 MobiDBLite consensus disorder prediction 7 29 - -
Acco08g2343 953 ProSiteProfiles Protein kinase domain profile. 131 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2343 953 PANTHER DUAL SPECIFICITY PROTEIN KINASE 58 476 - -
Acco08g2343 953 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Acco08g2343 953 Pfam Protein kinase domain 133 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2343 953 Gene3D Phosphorylase Kinase; domain 1 96 211 - -
Acco08g2343 953 MobiDBLite consensus disorder prediction 905 953 - -
Acco08g2343 953 Gene3D Transferase(Phosphotransferase) domain 1 212 474 - -
Acco08g2343 953 MobiDBLite consensus disorder prediction 1 29 - -
Acco08g2343 953 MobiDBLite consensus disorder prediction 905 935 - -
Acco08g2343 953 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Acco08g2343 953 FunFam Dual specificity tyrosine-phosphorylation-regulated kinase 1A 94 210 - -
Acco08g2343 953 SMART serkin_6 131 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2343 953 SUPERFAMILY Protein kinase-like (PK-like) 126 495 IPR011009 -
Acco08g2343 953 MobiDBLite consensus disorder prediction 754 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2343 Acco-ChrAcco08 39454517 39475396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2343 130 375 MAP Kinase Gene Family AT3G18040 32.950 1.18e-31 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Acco08g2343 Pkinase 7e-50 CL0016