Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2329 ATGTGTTTTAAGAGGAATTTCCTCATCCAAAAAGGGTTTTTCTTGATGATGTTGCTTTGTTTTGGTGTTGTCCAAGTAAGTTCGATTAATGAGGATGGTTCGATTCTTTTAGAGTTTAAAAAATTCCTTTCTGACCCACAAAATAGTCTTCATGATTGGAATTCTTCTGATTTGACTCCTTGCAATTGGACTGGTGTGCATTGCAATAATTCAGTGGTAACTTCTATAAATCTTAGTTTCCTTACTCTATCTGGCTTTTTATCTCCCATCATCTGCAACCTTCCTCATCTGGTTGAGTTGAATCTGTCAATGAATTTCATTTCTGGCCCTATTCCTGTTGGTTTCGTTGCTTGTAGGAGTCTAGAAATATTAGACCTTTGTACAAACAAATTTCATGGACAACTTGAGAACCCTTTCTGCCAAATTACCTCACTAAGAAAGCTTTATCTCTGTGAAAATTTTATGCACGGTGAAATGCCAGAAGAGGTTGGGAATTTGAATTCCCTTGAAGAGCTGGTCATTTATGGCAATAATTTAACTGGAAGAATTCCCACTTCAATAAGTCAATTGAAGCAACTAAGAATTATCAAGGCAGGCTTCAATAGTCTCTCAGGCCCAATACCTGCAGAAATTAGTGAGTGTGAGAGCTTGAAGCTGTTAGGATTGGCACAGAATCAGCTAGAAGGTTCAATACCAAGAGAGCTTCAGAAGCTTCAGAACCTTACCACTATACATTTGTACCAAAACTTTCTATCTGGGGAGATTCCCCCAGAAATTGGAAATATCAGTAGGTTGGAATTACTTGCTTTGCATCAAAATTTGTTCAGTGGAGCTATTCCAAAGGAGCTGGGGAAGTTATCTCACTTACAACGGTTGTATGTATATACAAACCGCTTGAATGGGACAATTCCTCCGGAGCTAGGGAACCTTACAAGTGCTTTGGAGATTGATCTTTCTGAGAACCTTTTGAGTGGTATGATTCCTAGAGAGTTGGGGCAGATCTCTAATCTTGGACTGCTTCATCTATTTGAAAACCTTCTGCAGGGAGAAATCCCTTTGGAACTTGGGCAGTTATGGCTACTCAATACTTTAGATTTGTCAATAAATAACTTAACAGGTACTATTCCATTAGTGTTTCAAAATCTTACATACATGGTGGATTTGCAGCTGTTTGACAACCAACTTGAGGGTAAGATACCTCCTGATCTTGGAGCTAGATGCAACCTCAGTGTTCTTGATTTATCTGCTAACAATCTCGTCGGTATGATACCTGCCCATCTTTGCAAATATCAGAAACTGAAATTTCTAAGCCTTGGGTCAAATAAGTTGTCTGGAAATATTCCGTATGATCTGAAAACTTGCAAGTCACTTGTGCAGCTTATGCTGGGAAACAACCAGCTGACAGGAGGCCTCCCCGTTGAATTGAATGAACTTCATAATCTTTCTGCACTTGAACTTCATCAGAATCGATTCACTGGGATAATAAACCGAGGGATAGGTCAACTCCAGAGTTTGATCAGGCTTCTGTTGTCAGATAATCATTTTTTTGGGCATCTACCTCCTGAGATTGGAAAATTAGCACAGCTTGTCTCATTCAATGTTTCCTCTAATCTTCTTAGTGGAAGCATCCCTGACGAGTTGGGAAACTGTGTAAAACTACAGAGGCTTGATCTTAGCAGGAATCAGTTCACTGGCACCCTTCCAGGTGAAATTGGCAAGCTGGTGAATTTGGAATTGTTGAAACTTTCTGATAATAAATTTTCAGGAGCAATACCAAGCGCTTTAGGGGATCTTACTCGTCTCACAGAGCTAGAGCTTGGTGGTAACTTGTTTTCAGGTAGCATTCCTCTTCATTTGGGAGGACTTACTGCTCTTCAGATTGCCCTTAATATGAGCCATAACAAACTATCTGGTGTAATTCCTGACAGCTTGGGGAACTTACGGATGTTGGAATTTCTTTATTTAAATGACAATGAGCTTGTTGGTGAAATTCCCACCTCTATAGGTAACTTGCCCAGCCTTTTGGTTTGCAATGTTTCTAACAACAACTTGACTGGAACTATCCCAAACACTCCTGCATTTCAAAAGATGGATTTCACAAATTTTGCTGGAAACAATGGACTGTGCCATGTAGGTTCCTATTATTGCCATTCATCCAAGTCCCCCCTTTCTCCTCCAAACCGAAGTTGGACTAGAGATGGTTCTTCCAGGGTGATGATAGTGAGTATAGTTTCGGGTGTGGTTGGATTGGTTTCTCTTACGTTCATAATCTGTATATGTTGGGCTATGAAGCGCAAAAGCCCTTCTTTTGTCTCCTTAGAAAGGCAAGCAATGCCTCATGCCCTAAACAACTATTATTTTCCGAAAGAAGGTTTCACATACCAGGATCTCTTGGAAGCCACTGGTAATTTTTCAGAAGCTGCAGTTATAGGAAATGGAGCATGCGGCACTGTCTACAAGGCTACAATGGCTGACGGTGAGGTGATTGCTGTCAAAAAGCTGAATTCTTCTGGAGAAAGAGCAAATGTTGACAGAAGCTTTCTTGCAGAGATTTCAACCCTTGGGAAGATCAGACACAGGAATATTGTGAAGCTGTATGGATTTTGTTTTCATGAGGATTCAAAGATTCTCTTATATGAGTACATGGAAAATGGCAGCCTTGGAGAACAACTCCATGCAAATCCAGAATCATGTCCACTAGATTGGAATTGTCGGTATAAGATTGCTCTTGGGGCTGCGCAAGGATTGTGCTACCTTCATTATGACTGCAAACCTCAAATCATTCACCGCGATATTAAGTCAAACAACATACTACTTGATGAGAATTTTCAGGCGCGCGTTGGAGACTTTGGCCTGGCAAAGTTGATTGACTTTTCATATTCCAAATCCATGACTACCGTGGCGGGTTCATTTGGCTACATTGCTCCTGAATATGCTTACACCATGAAGGTGACTGAGAAATGTGACATCTATAGCCTTGGGGTGGTTTTGTTGGAACTAGTCACCGGCCGTTCACCAGTTCAGCCGCTGGAACAGGGTGGTGATTTGGTGACTTGGGTGAGAAGATCAATTCAAGCATCAGTGCCAAAATTGGAACTACTTGACAAGCGACTGAATCTGAGTGAACAAAGAACAGTCGAAGAGATGTCTCTTGTTCTCAAAATTGCGTTGTTCTGCACCAGTGCCTCTCCTCTCAATAGGCCAACAATGAAAGAGGTCATTGCAATGTTGATCGATGCTAGAGAGTATGTCAGCAATTCTTCTTCAGTCCCTACATCTGAATCCCCACATGATACATGA 3300 0.4103 MCFKRNFLIQKGFFLMMLLCFGVVQVSSINEDGSILLEFKKFLSDPQNSLHDWNSSDLTPCNWTGVHCNNSVVTSINLSFLTLSGFLSPIICNLPHLVELNLSMNFISGPIPVGFVACRSLEILDLCTNKFHGQLENPFCQITSLRKLYLCENFMHGEMPEEVGNLNSLEELVIYGNNLTGRIPTSISQLKQLRIIKAGFNSLSGPIPAEISECESLKLLGLAQNQLEGSIPRELQKLQNLTTIHLYQNFLSGEIPPEIGNISRLELLALHQNLFSGAIPKELGKLSHLQRLYVYTNRLNGTIPPELGNLTSALEIDLSENLLSGMIPRELGQISNLGLLHLFENLLQGEIPLELGQLWLLNTLDLSINNLTGTIPLVFQNLTYMVDLQLFDNQLEGKIPPDLGARCNLSVLDLSANNLVGMIPAHLCKYQKLKFLSLGSNKLSGNIPYDLKTCKSLVQLMLGNNQLTGGLPVELNELHNLSALELHQNRFTGIINRGIGQLQSLIRLLLSDNHFFGHLPPEIGKLAQLVSFNVSSNLLSGSIPDELGNCVKLQRLDLSRNQFTGTLPGEIGKLVNLELLKLSDNKFSGAIPSALGDLTRLTELELGGNLFSGSIPLHLGGLTALQIALNMSHNKLSGVIPDSLGNLRMLEFLYLNDNELVGEIPTSIGNLPSLLVCNVSNNNLTGTIPNTPAFQKMDFTNFAGNNGLCHVGSYYCHSSKSPLSPPNRSWTRDGSSRVMIVSIVSGVVGLVSLTFIICICWAMKRKSPSFVSLERQAMPHALNNYYFPKEGFTYQDLLEATGNFSEAAVIGNGACGTVYKATMADGEVIAVKKLNSSGERANVDRSFLAEISTLGKIRHRNIVKLYGFCFHEDSKILLYEYMENGSLGEQLHANPESCPLDWNCRYKIALGAAQGLCYLHYDCKPQIIHRDIKSNNILLDENFQARVGDFGLAKLIDFSYSKSMTTVAGSFGYIAPEYAYTMKVTEKCDIYSLGVVLLELVTGRSPVQPLEQGGDLVTWVRRSIQASVPKLELLDKRLNLSEQRTVEEMSLVLKIALFCTSASPLNRPTMKEVIAMLIDAREYVSNSSSVPTSESPHDT 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2329 1099 Gene3D Ribonuclease Inhibitor 184 282 IPR032675 -
Acco08g2329 1099 Gene3D Ribonuclease Inhibitor 28 183 IPR032675 -
Acco08g2329 1099 Gene3D Phosphorylase Kinase; domain 1 769 881 - -
Acco08g2329 1099 SMART LRR_typ_2 238 262 IPR003591 -
Acco08g2329 1099 SMART LRR_typ_2 478 501 IPR003591 -
Acco08g2329 1099 SMART LRR_typ_2 502 526 IPR003591 -
Acco08g2329 1099 SMART LRR_typ_2 647 671 IPR003591 -
Acco08g2329 1099 SMART LRR_typ_2 622 646 IPR003591 -
Acco08g2329 1099 SMART LRR_typ_2 94 118 IPR003591 -
Acco08g2329 1099 SMART LRR_typ_2 166 190 IPR003591 -
Acco08g2329 1099 SMART LRR_typ_2 286 310 IPR003591 -
Acco08g2329 1099 SMART LRR_typ_2 574 598 IPR003591 -
Acco08g2329 1099 Pfam Leucine Rich Repeat 552 574 IPR001611 GO:0005515
Acco08g2329 1099 Gene3D Transferase(Phosphotransferase) domain 1 882 1094 - -
Acco08g2329 1099 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Acco08g2329 1099 Pfam Protein kinase domain 806 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2329 1099 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 281 375 - -
Acco08g2329 1099 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 336 1078 - -
Acco08g2329 1099 FunFam Predicted protein 185 280 - -
Acco08g2329 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Acco08g2329 1099 SUPERFAMILY RNI-like 315 691 - -
Acco08g2329 1099 SUPERFAMILY Protein kinase-like (PK-like) 785 1077 IPR011009 -
Acco08g2329 1099 ProSiteProfiles Protein kinase domain profile. 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2329 1099 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 882 1094 - -
Acco08g2329 1099 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 406 720 - -
Acco08g2329 1099 Gene3D Ribonuclease Inhibitor 286 452 IPR032675 -
Acco08g2329 1099 Gene3D Ribonuclease Inhibitor 453 719 IPR032675 -
Acco08g2329 1099 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 769 881 - -
Acco08g2329 1099 SMART serkin_6 804 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2329 1099 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 28 184 - -
Acco08g2329 1099 SUPERFAMILY L domain-like 30 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2329 Acco-ChrAcco08 39185968 39189430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2329 23 1089 Receptor kinase-like Gene Family AT1G73080 38.420 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco08g2329 Pkinase 1.2e-48 CL0016