Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2328 ATGGAAGATCGCAATCAATGGCATCTTTACGACCCACTTCTTCTCACTGACGCTTCTTTGCAGCATAAAAACTCTTCTATTCAGTCCATTTACAATTCACAAACGTCACTGAGCTCTCTAAGTCCAACAATGGCGGATACTGAATGGCAGGACAGCCAAAATGACGAATTTTCTTGGAAAAGACGAGAGTTTGAAAAAAAAGATGTGCAATTGGAAGACCCGATAGCAAAAAAAGTGATTGACGGCCGATCACTGTTAGGATATTCTTTAACGTCGCCTGATTTGGTCACCTGCGCTAGCTCACCAGATATTGCCATGGAATCCCCTGAGATGTTGGAAAACAAATCTCGTCAAAAAGTGGAGTCGCCTATGGAGCTTTCTTTAGAGAATGGAATTAATGGGTCTGATGTTGTAAAGCCTCAGAAGATTCCAACTGTCAAATTCTCTATGTTTTGTGAAACCTTCAAAGAGCTGTCTCCCGATGCCTCTTTTGAGCTTTTCCCAGCCCCAGAAGTCACCGGTAAGTCGCCTCAAGACTACCCTTCTAGAGAAAATGAATTGCAAGAAGATTTGAAAGTATCACAAGAGACAGAGTTGGATTCTCCATATGGTAGCGGAGATAACGAGGAAGAAGAGGATTTTCAGAAGCTGAGTAGGGAATTCAAGTGTCAGAAAAAGGAGCTGGCTGAAACTAGGAGGATGTTGGAGGAACTCAAAAGGGAGAATCAACAGAAGAATAGAGAATGCCAAGAAGCATTGAAGTCTTTGCAAGATCTTCAGAATGAGCTCATGCGCAAGTCCATGCATGTAGGATCATTGGCATTTGCCGTTGAGGGGCAAGTAAAAGAAAAAAGCAGGTGGTTTTCCTCTCTGAGAGACTTGATGAGGAAAGTAAAGATTATGAAAATGGAACACATCAAACTATCAGAGGAAGTAGAGACGTATAAGAAGTGTCTTGCAGATGTGAGTGAAATGGGAATTACTATAAAGTCCAAGATACATGAGCAGCTGGAGCTTCACGAAGATCTCAAGACCAAATATCTAGATGGCGCTGGGAAACAAAAAGAACTTTACAATAAGGTTTTGGAGCTGAAAGGAAACATCAGGGTCTTTTGCCGGTGTAGGCCTCTTAATGCAGAAGAGATGACATCGGGAGCAAGAATGGCAATAGATTTTGAATCAGCGAAAGATGGTGAACTTACGGTACTGTCAAATGGGGCTTCTAGAAGGACTTTCAAGTTTGATGCTGTTTTTGGGCCCCAAGCAGATCAAGCCGACATATTTGAAGACACAGCACCATTTGCAACCTCAGTTCTAGATGGGTATAATGTATGCATATTTGCTTATGGGCAGACTGGAACAGGAAAAACATTTACAATGGAAGGTACAGAAAAGGCACGTGGAGTTAATTTCAGGACTCTTGAGAAAATGTTTGACATAATCAAAGAGAGACAGAAGCTCTATCGTTATGATGTCTCTGTAAGCGTCTTAGAAGTCTACAATGAGCAAATAAGAGACTTGCTTTTCTCAGGAAATCAGCCTGGAATAGCTGCAAGAAGGCTTGAAATAAGGCAAGCAGGCGAAGGAATGCACCATGTTCCGGGACTTGTGGAGGCACAAGTGAATAACATGACTGAAGTCTGGGAAGTCCTACAAACTGGCAGCAACGCAAGGGCTGTTAGCTCAACCAATGCCAATGAGCACAGCAGTCGATCCCACTGCATTCACTGTGTGATGGTGAAGGGGGAGAATTTGTTGAATGGGGAATGCACAAGAAGCAAGTTGTGGCTAGTAGACCTGGCAGGCAGCGAGCGAGTGGCTAAAACAGAAGTGCAAGGGGATCGACTCAAGGAAACTCAGAATATTAATAGGTCTCTCTCTGCACTAGGAGATGTTATATCAGCTCTTGCAACAAAATGCTCACATGTTCCCTTCAGAAATTCCAAACTCACACACTTGCTGCAAGACTCTTTAGGAGGAGATTCAAAGGCGCTCATGTTTGTACAGATTAGTCCTAATGAAAATGATTTAAGTGAGACGATTTGCTCTCTGAACTTTGCTAGTAGAGTGAGAGGAATAGAATTAGGGCCTGCAAAAAAGCAAATGGACCCTACCGAGCTTCTCAAATACAAACAATTGGCTGGGAAAACCAAGCAAGAGATGAAGATTAAGGACTTGCAAATCATGAAAATGGAGGAAACAATTCAAGGATTAGATTCCAAGATAAAGGAGAGAGATGTTAAAACTAAAACTCTGCAAGATAAGGTCAAGGAATTGGAATCCCAACTTTTGATTGAGAGAAAGCTGGCGCGTCAACATGTAGACTCAAAGATAGCTGAGCAGCATCTGCTTAAACATCAAGAGCAAAACAACACACCAATGAGACCAGCACTTGCAACCAAACCGCTAGGAATTCACAAGAACTTGAATGATTTCATCAGTTCAACTAGACCACTTATGGAGAACAATATGTTAAAGCACCCCTCACTGCCCTTTTCAACGTTGGAAAACTCTATCAAGTGCATTGACCACGCCGAGAAAGAGAACAATCCTGACATAGTTGACAAACTTGTACTGCCTAAAAGGACTGGAAGAGCTTCTATCTGCACAACTACTCCACGTATTCCTTCAGTCACAACTTTAAGGCGAAACTCACTGATACCTCTCCCAACTGTGGCTAACTTACGTCAACTCCCACCAACAGTAATGCCAGTGCTAGAAAGTAGAGCTGAAGAGGAAGAAAGCAATGACGAAGTGGGAAACTGTTTGGCTGCACAGACATATCTTGAGAGTCCTAAACAAAGAATGAGGAGTGAAAGTAAGAAGAGAGGAAGCAACATGCTAAGGCGAAGCTTATATAAAAAGATTCAGAACAAGTCGCCAATTCAACAACATATGAGAAGGGTTGGTGTAAATGTAGGTATGGAGAAAGTGAGAATTTCAATTGGGAGTCAAGGGAGGTTGATGGCAAAGAGGGTGTTGAGGAAAAATGGTAGAAGAAATGGAACAGAAGAGACTCAGCAAAAGAATAGTCAAAAAGAAAAGGAAAGAGGGTGGAATGCAGGTACAGCAGGCAAATCCACTTTTTGA 3090 0.4233 MEDRNQWHLYDPLLLTDASLQHKNSSIQSIYNSQTSLSSLSPTMADTEWQDSQNDEFSWKRREFEKKDVQLEDPIAKKVIDGRSLLGYSLTSPDLVTCASSPDIAMESPEMLENKSRQKVESPMELSLENGINGSDVVKPQKIPTVKFSMFCETFKELSPDASFELFPAPEVTGKSPQDYPSRENELQEDLKVSQETELDSPYGSGDNEEEEDFQKLSREFKCQKKELAETRRMLEELKRENQQKNRECQEALKSLQDLQNELMRKSMHVGSLAFAVEGQVKEKSRWFSSLRDLMRKVKIMKMEHIKLSEEVETYKKCLADVSEMGITIKSKIHEQLELHEDLKTKYLDGAGKQKELYNKVLELKGNIRVFCRCRPLNAEEMTSGARMAIDFESAKDGELTVLSNGASRRTFKFDAVFGPQADQADIFEDTAPFATSVLDGYNVCIFAYGQTGTGKTFTMEGTEKARGVNFRTLEKMFDIIKERQKLYRYDVSVSVLEVYNEQIRDLLFSGNQPGIAARRLEIRQAGEGMHHVPGLVEAQVNNMTEVWEVLQTGSNARAVSSTNANEHSSRSHCIHCVMVKGENLLNGECTRSKLWLVDLAGSERVAKTEVQGDRLKETQNINRSLSALGDVISALATKCSHVPFRNSKLTHLLQDSLGGDSKALMFVQISPNENDLSETICSLNFASRVRGIELGPAKKQMDPTELLKYKQLAGKTKQEMKIKDLQIMKMEETIQGLDSKIKERDVKTKTLQDKVKELESQLLIERKLARQHVDSKIAEQHLLKHQEQNNTPMRPALATKPLGIHKNLNDFISSTRPLMENNMLKHPSLPFSTLENSIKCIDHAEKENNPDIVDKLVLPKRTGRASICTTTPRIPSVTTLRRNSLIPLPTVANLRQLPPTVMPVLESRAEEEESNDEVGNCLAAQTYLESPKQRMRSESKKRGSNMLRRSLYKKIQNKSPIQQHMRRVGVNVGMEKVRISIGSQGRLMAKRVLRKNGRRNGTEETQQKNSQKEKERGWNAGTAGKSTF 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2328 1029 CDD KISc_C_terminal 365 695 - -
Acco08g2328 1029 MobiDBLite consensus disorder prediction 182 196 - -
Acco08g2328 1029 MobiDBLite consensus disorder prediction 997 1020 - -
Acco08g2328 1029 PRINTS Kinesin heavy chain signature 563 580 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco08g2328 1029 PRINTS Kinesin heavy chain signature 643 664 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco08g2328 1029 PRINTS Kinesin heavy chain signature 441 462 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco08g2328 1029 PRINTS Kinesin heavy chain signature 594 612 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco08g2328 1029 Coils Coil 214 266 - -
Acco08g2328 1029 ProSiteProfiles Kinesin motor domain profile. 367 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco08g2328 1029 MobiDBLite consensus disorder prediction 168 215 - -
Acco08g2328 1029 Coils Coil 291 311 - -
Acco08g2328 1029 Pfam Kinesin motor domain 373 693 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco08g2328 1029 MobiDBLite consensus disorder prediction 993 1029 - -
Acco08g2328 1029 ProSitePatterns Kinesin motor domain signature. 593 604 IPR019821 GO:0003777|GO:0005524|GO:0007018
Acco08g2328 1029 MobiDBLite consensus disorder prediction 928 947 - -
Acco08g2328 1029 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 727 IPR027417 -
Acco08g2328 1029 Gene3D Kinesin motor domain 362 736 IPR036961 -
Acco08g2328 1029 FunFam kinesin-like protein KIN-14R 312 695 - -
Acco08g2328 1029 SMART kinesin_4 365 701 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Acco08g2328 1029 Coils Coil 742 762 - -
Acco08g2328 1029 PANTHER KINESIN-LIKE PROTEIN KLP-3 126 888 IPR027640 GO:0003777|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2328 Acco-ChrAcco08 39179339 39184131 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2328 354 727 Calmodulin-binding Proteins AT5G65930 42.708 1.92e-81 287