Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2320 ATGAGCAATATAAGCATGGTGGAGGCCAAGTTGCCACCAGGTTTCAGGTTCCATCCCAGAGATGAAGAGCTTGTGTGCGATTACTTGATGAAGAAAGCCACTCACTCTGATAATTCCGATTCCGCTCTCATGATTGACGTTGACCTTAACAAGTGTGAGCCATGGGATATTCCAGAAAGGGCACGCGTGGGAGGGAAGGAGTGGTATTTCTACACGCAGAGGGACCGGAAGTACGCGACGGGGATGAGAACAAATAGAGCGACGGCGTCAGGGTACTGGAAGGCCACAGGGAAGGACAGGTTTGTCCTTAGGAAGGGCAAAGTGGTTGGCATGAGAAAGACTTTGGTTTTCTATGAGGGAAGAGCCCCCAAAGGCACCAAGACCGACTGGGTCATGCACGAGTTTCGACTTCATCCCTCTCCTCATTCTTGTAATCTCCCCAACGAAGACTGGGTTCTCTGTAGGGTTTTCTCCAAGAACAGAGATGAACACAATAATGATAATAATAATAATCATGGAAAATATGGCATACGAAGCTCCTATGTGGCCGGCTCTTCGTCTCTTCCTGAATTAATGGATTCTTACATTAGTTTTGATCAGGCTTCTGGTGATCATGCAGCTCATGAATATGAGCAAGTGCCCTGCTTCTCCATCCCTCCTCCTCCAAACCCTAACCCTAGCAGCCTCCATCACACCAACTTATTATCGGCTCCCTCTCCAAATGCAGCTCCAGCTCCATTCTCTGATGACTCCCACGTTCTTAAATCCTTGTTGACACAACTCTCCAACATGGAAACTCAGCAAGGATTGCCCTCCAGCTTTGAAGCTCATCATCATGCTTCTCAGGCCTCCTTTTTGTCTCAACCGCCTATTATTCCCACTTATTTATGGAACAATCACTAG 903 0.4762 MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKATHSDNSDSALMIDVDLNKCEPWDIPERARVGGKEWYFYTQRDRKYATGMRTNRATASGYWKATGKDRFVLRKGKVVGMRKTLVFYEGRAPKGTKTDWVMHEFRLHPSPHSCNLPNEDWVLCRVFSKNRDEHNNDNNNNHGKYGIRSSYVAGSSSLPELMDSYISFDQASGDHAAHEYEQVPCFSIPPPPNPNPSSLHHTNLLSAPSPNAAPAPFSDDSHVLKSLLTQLSNMETQQGLPSSFEAHHHASQASFLSQPPIIPTYLWNNH 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2320 300 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Acco08g2320 300 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 238 - -
Acco08g2320 300 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Acco08g2320 300 MobiDBLite consensus disorder prediction 215 248 - -
Acco08g2320 300 SUPERFAMILY NAC domain 2 159 IPR036093 GO:0003677|GO:0006355
Acco08g2320 300 Gene3D NAC domain 20 164 IPR036093 GO:0003677|GO:0006355
Acco08g2320 300 FunFam NAC domain-containing protein 100-like 20 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2320 Acco-ChrAcco08 39150105 39152094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2320 2 298 NAC Transcription Factor Family AT1G56010 51.515 8.85e-104 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco08g2320 NAM 4.5e-38 No_clan