Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2306 ATGGAAGATTTGAGAAGCACTACAGAAGAAGAGGAGTTAGAACTTCCAGGGTTTCGATTCCATCCAACGGATGAGGAACTCGTGAGATTCTACCTCAGAAGGAAGCTCGACAAGAAACCCATCAGTATCGAACTCATCAAGCAGATTGATATCTACAAATACGACCCTTGGGATCTTCCCAAAGCTAGTTGGACGGGGGGAGAGAAGGAGTGGTACTTCTATTGCAGAAGGGGGAGGAAGTACAAGAACAGTATCAGGCCGAACAGAGTGACAGGATCAGGGTTTTGGAAGGCAACAGGAATAGACAAGCCTGTGTATTCTGTTGCAGGAGAAGGCAATAGTGATTGCATTATTGGCCTCAAGAAAACACTTGTTTACTATCGTGGTAGTGCGGGTAAAGGCACCAAAACTGAGTGGATGATGCATGAGTTTCGCCTTCCCTCCAACATAAATCACCCTTCTCATAATCCCCAAGAAGCTGAAATTTGGACGCTTTGTAGAATTTTCAAAAGAACTGTAGCGCAAAGAAAATGCACACCAGATTGGGCACAAATGGCTGCAAAGCGTCGTTGCAGTGACAAGAGCAGATCAATAAGTAATAATAATAGTGCTGTGGATTCTTGTAATAGTAATATTACTTACGATCTAGAATCATATATCAACTTTGGATCAGGCAGCCCAGAGCAGAAGCCTCTGCTTGTTCATAACTACAGTACCAGCAACAATAATCATCAATATAATTGTGATGATCATCAAAGGAATCATCATTTCAGCCGTAGTTCAATGGCCGCACAACATCAGCAGCAGCAGCAGCCTCATCAATTAACGGCGTCGTCGTCTTCGCCATCGTCAGCTTTGAGGTTCCGGGGTAATAATAACCAGCAGGCTTCCAATAATGACCTGTTTGCGTTTGAGAACCCATGGGACGAGCTTGAATCAGTGGTGCAATTTTGCTCTTAA 960 0.4396 MEDLRSTTEEEELELPGFRFHPTDEELVRFYLRRKLDKKPISIELIKQIDIYKYDPWDLPKASWTGGEKEWYFYCRRGRKYKNSIRPNRVTGSGFWKATGIDKPVYSVAGEGNSDCIIGLKKTLVYYRGSAGKGTKTEWMMHEFRLPSNINHPSHNPQEAEIWTLCRIFKRTVAQRKCTPDWAQMAAKRRCSDKSRSISNNNSAVDSCNSNITYDLESYINFGSGSPEQKPLLVHNYSTSNNNHQYNCDDHQRNHHFSRSSMAAQHQQQQQPHQLTASSSSPSSALRFRGNNNQQASNNDLFAFENPWDELESVVQFCS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2306 319 SUPERFAMILY NAC domain 14 170 IPR036093 GO:0003677|GO:0006355
Acco08g2306 319 Gene3D NAC domain 23 174 IPR036093 GO:0003677|GO:0006355
Acco08g2306 319 FunFam NAC domain-containing protein 35 23 174 - -
Acco08g2306 319 ProSiteProfiles NAC domain profile. 14 171 IPR003441 GO:0003677|GO:0006355
Acco08g2306 319 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 280 - -
Acco08g2306 319 MobiDBLite consensus disorder prediction 258 298 - -
Acco08g2306 319 Pfam No apical meristem (NAM) protein 16 146 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2306 Acco-ChrAcco08 39004830 39006807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2306 1 183 NAC Transcription Factor Family AT5G39820 53.623 2.41e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco08g2306 NAM 9.1e-36 No_clan