Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2305 ATGAAGGAAGGTGGTAGAAAACATGGTGCACCGTCGCCATGCGCAGCGTGCAAGCTTATCCGGCGAAGATGTGCTCAGGATTGCCTCTTTGCTCCTTACTTTCCAGCCGATCAACCCCACAAATTTGCAAGTGTTCACAAGGTTTTTGGTGCTAGCAATGTCAATAAAATGTTGCAGGAACTACCAGAGGAGCAAAGGAGTGACGCGGTGAGTTCAATGGTATATGAAGCAAATGCGAGGATGAGGGACCCAGTGTATGGATGTGTGGGGGCCATATCGTGTCTTCAGCAACAAGTTGACATGCTTCAAACACAACTTGCTCTTGCCCAGGCAGAGCTTGTTCACATCAGAAATTCTTCTTCTTCATCAACCCAACCTCAATCCTCCTCTCATCATCATAATGATACCAAGTCGTCTTCTTTTTTGGCCATCGACAATGTCACCGAAAGCTTGTGGTCTTGCTAG 465 0.471 MKEGGRKHGAPSPCAACKLIRRRCAQDCLFAPYFPADQPHKFASVHKVFGASNVNKMLQELPEEQRSDAVSSMVYEANARMRDPVYGCVGAISCLQQQVDMLQTQLALAQAELVHIRNSSSSSTQPQSSSHHHNDTKSSSFLAIDNVTESLWSC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2305 154 Coils Coil 92 112 - -
Acco08g2305 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 11 135 - -
Acco08g2305 154 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Acco08g2305 154 MobiDBLite consensus disorder prediction 118 139 - -
Acco08g2305 154 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2305 Acco-ChrAcco08 38964554 38967661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2305 1 123 AS2 family AT1G31320 78.862 5.80e-63 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco08g2305 LOB 1.4e-42 No_clan