Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2301 ATGGCTTGGTTTTTGCCTGGTGATATCCCTTCTAATGGAACACATGGTTTCCAAAGACACCCTAAGGTGTCAGAGGATGGCCCTAGTTGGTATGTTACGAGGAGGGAGATTGAAGAAAATTCACCATCTAAACAAGATGGTATAGATTGGAAGAAAGAGACCCAATACCGCAAATCATATTGCACATTCCTACAAGATTTAGGCATGAGACTTAAAGTACCTCAGGTAACCATTGCTACAGCAATAATTTTTTGTCATCGATTCTACCTTCGTCATTCCCTTGCAAGGAACGATAGGAGGATCATTGCAACAGTGTGCATGTTTCTCGCTGGGAAGGTTGAAGAAACTCCTCGCCCTTTGAAAGATGTAATTCTTGTCTCGTATGAAATTATGAACAAGGACGCTGTAGAAGCTCAAAGAATCAAACAAAAGGAGGTATATGAACAGCAGAAAGAATTAATCTTAGCTGGAGAGAGGGTTGTTCTTCAAACTCTTGGTTTCGATCTTAATCTGCACCATCCTTATAAACCTCTCGTTGAGGCTATTAAAAAATTTAAAGTTGCTCAAAATGCCCTTGCTCAAGTTGCGTGGAATTTTGTTAATGATGGACTTCGGACATGTCTTTGCCTGCAATTCCAGCCCCATCATATTGCAGCAGGAGCTATTTTCCTTGCTGCCAAGTTCCTTAAGGTGAAGCTCCCATCAGATGGGGAGAAGGTCTGGTGGCAAGAGTTTGATGTTACCCCTCGGCAATTGGAGGAAGTTAGTAATCAAATGTTGGAGCTATATGAACAAAACCGAGGGCCACTTTCAAATGACATTGAAGGTGCTCCAGGAAGTGGGGCCACTAATCCGGCTGCTGCAAAGGTTCCTGCTAGCAATGATGAAAATACAACGTCAAACAGTAATTCTTTTACTGGAGCTACGAGTTCAAAACTTGAAACCTCAAAGCCTGGAGCTTCCAAGACAGTGTTCAAATCATCTGCTGATAATGTTGGGCATCCAGTGCCGAACTTCAGTAGAAGTACTCATTATGGGGGCACAGAAATGAAACACAGGGTAGATGAAGCCAAGGGTAATCATCTTCTCGAGGGTGAAGCCCTGCCACACAAGGAAAACTTGCAGGGAGCTCAAGACAAGTTGAGGTCTCAATCAGGTTATGTAGAAGAGCGAGATAGCAATGTTGGGAGAAATGAAATGAAGGAGGCTGCTGAGTTGAATGTTAAACATGCCAACAGAGATCCTGATCACAGAGATAGTACATTTGGGCGGCCACCTCAGGAAACTATCAACAAAATTGACAGAGACAAGGTAAAGGCTGCACTAGAGAAACGTAGGAAAGCATCTGGTCATATAACTAAGAAAACAGAGGTTATGGATGATGACGATCTGATTGAGAGGGAGCTGGAGGATGGAATTGAGCTGGCTGCTCAGAATGAAAAGGACAAGCAGGATAGGAGGCAGAATTGGTCTAAGCCCTCAGATAGATCAGATGATGGGAATATGCCACATGGAAAGCGCCAATATCTTGTTGACGAGCATCACGGGGTAAAGAGCCTGCCATCATCTGAACCTGATCTTAGTAACGTTGAAGAAGGGGAGGTATCGGCACTTAATGCCATTGGCCCTGGACTTCATTCACCCAAGTCAGGCAGCCGCAAGAGAAAAGCTGGGAGCTCACCTGACAGGGATTTGTAG 1698 0.4417 MAWFLPGDIPSNGTHGFQRHPKVSEDGPSWYVTRREIEENSPSKQDGIDWKKETQYRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFYLRHSLARNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIMNKDAVEAQRIKQKEVYEQQKELILAGERVVLQTLGFDLNLHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTCLCLQFQPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRGPLSNDIEGAPGSGATNPAAAKVPASNDENTTSNSNSFTGATSSKLETSKPGASKTVFKSSADNVGHPVPNFSRSTHYGGTEMKHRVDEAKGNHLLEGEALPHKENLQGAQDKLRSQSGYVEERDSNVGRNEMKEAAELNVKHANRDPDHRDSTFGRPPQETINKIDRDKVKAALEKRRKASGHITKKTEVMDDDDLIERELEDGIELAAQNEKDKQDRRQNWSKPSDRSDDGNMPHGKRQYLVDEHHGVKSLPSSEPDLSNVEEGEVSALNAIGPGLHSPKSGSRKRKAGSSPDRDL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2301 565 MobiDBLite consensus disorder prediction 470 520 - -
Acco08g2301 565 Pfam Cyclin, N-terminal domain 32 170 IPR006671 -
Acco08g2301 565 SUPERFAMILY Cyclin-like 26 170 IPR036915 -
Acco08g2301 565 FunFam Cyclin-T1-5 like 171 275 - -
Acco08g2301 565 SMART cyclin_7 176 261 IPR013763 -
Acco08g2301 565 SMART cyclin_7 62 163 IPR013763 -
Acco08g2301 565 Gene3D - 171 275 - -
Acco08g2301 565 CDD CYCLIN_AcCycT_rpt1 46 168 - -
Acco08g2301 565 MobiDBLite consensus disorder prediction 367 429 - -
Acco08g2301 565 MobiDBLite consensus disorder prediction 444 462 - -
Acco08g2301 565 MobiDBLite consensus disorder prediction 384 429 - -
Acco08g2301 565 MobiDBLite consensus disorder prediction 268 346 - -
Acco08g2301 565 Gene3D - 20 169 - -
Acco08g2301 565 CDD CYCLIN_AcCycT_rpt2 172 264 - -
Acco08g2301 565 PANTHER CYCLIN 29 308 IPR043198 GO:0006357|GO:0016538
Acco08g2301 565 SUPERFAMILY Cyclin-like 172 268 IPR036915 -
Acco08g2301 565 MobiDBLite consensus disorder prediction 290 345 - -
Acco08g2301 565 FunFam Cyclin-T1-5 like 20 169 - -
Acco08g2301 565 MobiDBLite consensus disorder prediction 444 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2301 Acco-ChrAcco08 38877394 38890138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2301 57 178 Core Cell Cycle Gene Families AT5G27620 29.508 7.99e-06 46.2