Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2293 ATGATTTTGCTACTACTCAATCGGGGTTGTGTATATGCAAAATTGTTTAGAGATATTATCCGTGCTATCATTGGACTTTATTACGAAATGGATGAACTGGCTCTTGACAAACTCTGGGTGATCAAGAGTGGCCTTCATTCTGGACTCGATTGTTTGCAGCAAAATTTTCCTTGTTTTCGTGGTACTGGAATATATTATAACTTTGCAATCAAGTGTGGCGGTCCTCCAATTACAACAACAGAAGGAATTACTTATGACACAGATAATGAGACACTTGGTCCTGCAACTTATTTTGTTACTGATACAAGAAGATGGGCAGTTAGCAATGTTGGGTTATTTACTGGGTCAAGCAATCCTCTATACAAACGTTTTGCATCCAATCAGTTCACTGGTACTGTGGACCCAGAGCTCTTCCAGACAGCACGGCTATCGGCATCTTCGTTAAGATATTATGGTCTGGGGCTGGAAAATGGGAATTATAACATTTCCCTCTTTTTCGCTGAAACATCTATTCTAGATACTACTACGTGGAAAAGTCTTGGAAGACGGGTCTTTGATATATATATCCAGGGGAATCGTGTTTGGAAGGACTTTGACATAAAAAGAGAAGCTGGGGGTGCCTCTTTTAGAGCTGTCCGAAGGGATTTTCGGGTTAATGTGTCACAAAACTTTGTTGAGATCCATCTCTTTTGGGCCGGAAAAGGGACTTGCTGTATTCCAGCTCAAGGTACTTATGGTCCTCTGATTTCAGCAATCAGCGCTACCCCAGATTTCATTCCCAAAGTCAGTAACAAACTTCCAGGCAGTTCAAAGAACAGAACCGGTTTGATTGTGGGCATTATTGTTGGTGTTGGAGTTGTAAGCTTTCTGTCTGTTCTTGTGGTTTTCTGTATCATCCAGAGAAGAAAGCATCACGGAGGTGGTGAAGAAGAGCTTTTAGATATTGATACGAAGACATACACTTTCAGCTACTCTGAGTTAAAGAATGCTACAGGTGACTTCAATCCTGACAACAAACTGGGGGAGGGAGGTTTCGGACCTGTTTATAAGGGAACACTTAATGATGGAAGAGTAGTTGCTGTGAAACAATTATCTGTAGGATCTCATCAAGGAAAGAGTCAGTTCATAGCTGAGATTGCAACAATATCTGCTGTGCAACATCGCAATCTTATTAAATTATATGGATGTTGCCTTGAAGGAAATAAAAGACTTCTTGTCTATGAGTATCTAGAAAACAAGAGTCTTGATCAAGCATTATTTGGAAATCGTTTAGCTCTCAACTGGCCCACACGCTATGATATCTGCATGGGTGTGGCTAGAGGTTTAGCTTATCTTCATGAAGAGTCTCGGCTCCGTATTGTTCACCGTGACGTAAAGGCTAGTAATATTCTGCTTGATCATGAGCTTACCCCTAAAATATCTGATTTTGGTTTGGCCAAGCTATATGATGATAAAAAGACCCATTTAAGCACCCGTGTTGCCGGGACAATTGGATATCTTGCTCCGGAGTATGCCATGCGTGGACACCTTACAGAGAAAGCAGATGTGTTTTCCTTTGGTGTTTCGGCCCTAGAGATTGTTAGTGGGAGGCCAAATTCTGATTCAAACTTGGAAGGAGAGAAGATCTATCTTCTAGAATGGGCTTGGCAGTTGCATGAAACGAATAGTATAGTGGAACTGGCAGATCCTAGACTGTCATCAGATTTCAGTGAGGAAGAATTTAAGAGAATTGTGGGGATTGCTCTTCTCTGCACTCAAACTTCACCACTGTCAAGGCCAGCAATGTCCCGTGTCGTGGCAATGCTTTCTGGAGATATGGAAGTGAGCTCTGTAACATCAAGGCCTGGTTACTTGACAGACTGGAAGTTTGATGATGAGTACACCTTCACGACTGGCTTGGCTACAAAGGGATCAGATATGACTCTATATAAATCATCTGCAACTACAAGCCAATCACCTGTAGATGCTTCTGATTCCGTCCTTCCTCACATTGTTGGTGAAGGTAGCTAA 2010 0.4194 MILLLLNRGCVYAKLFRDIIRAIIGLYYEMDELALDKLWVIKSGLHSGLDCLQQNFPCFRGTGIYYNFAIKCGGPPITTTEGITYDTDNETLGPATYFVTDTRRWAVSNVGLFTGSSNPLYKRFASNQFTGTVDPELFQTARLSASSLRYYGLGLENGNYNISLFFAETSILDTTTWKSLGRRVFDIYIQGNRVWKDFDIKREAGGASFRAVRRDFRVNVSQNFVEIHLFWAGKGTCCIPAQGTYGPLISAISATPDFIPKVSNKLPGSSKNRTGLIVGIIVGVGVVSFLSVLVVFCIIQRRKHHGGGEEELLDIDTKTYTFSYSELKNATGDFNPDNKLGEGGFGPVYKGTLNDGRVVAVKQLSVGSHQGKSQFIAEIATISAVQHRNLIKLYGCCLEGNKRLLVYEYLENKSLDQALFGNRLALNWPTRYDICMGVARGLAYLHEESRLRIVHRDVKASNILLDHELTPKISDFGLAKLYDDKKTHLSTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVSALEIVSGRPNSDSNLEGEKIYLLEWAWQLHETNSIVELADPRLSSDFSEEEFKRIVGIALLCTQTSPLSRPAMSRVVAMLSGDMEVSSVTSRPGYLTDWKFDDEYTFTTGLATKGSDMTLYKSSATTSQSPVDASDSVLPHIVGEGS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2293 669 Gene3D Transferase(Phosphotransferase) domain 1 410 614 - -
Acco08g2293 669 ProSiteProfiles Protein kinase domain profile. 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2293 669 FunFam Leucine-rich repeat receptor-like protein kinase 65 256 - -
Acco08g2293 669 FunFam Putative LRR receptor-like serine/threonine-protein kinase 410 614 - -
Acco08g2293 669 MobiDBLite consensus disorder prediction 647 669 - -
Acco08g2293 669 CDD STKc_IRAK 340 602 - -
Acco08g2293 669 Pfam Protein tyrosine and serine/threonine kinase 337 602 IPR001245 GO:0004672|GO:0006468
Acco08g2293 669 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 48 633 - -
Acco08g2293 669 Pfam Malectin domain 67 252 IPR021720 -
Acco08g2293 669 Gene3D Phosphorylase Kinase; domain 1 297 409 - -
Acco08g2293 669 Gene3D - 66 256 - -
Acco08g2293 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Acco08g2293 669 SMART serkin_6 334 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2293 669 FunFam Leucine-rich repeat receptor-like protein kinase 304 409 - -
Acco08g2293 669 SUPERFAMILY Protein kinase-like (PK-like) 317 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2293 Acco-ChrAcco08 38751564 38757576 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2293 47 642 Receptor kinase-like Gene Family AT1G56120 64.696 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco08g2293 PK_Tyr_Ser-Thr 1.4e-47 CL0016