Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2279 ATGTCTGCTCTTGTGCTTCTTTGGGATGTTCCATTCTATGGGGATTTCATCGTCTGGGCACTCATATCTGGATTATATATTCTGCTATTAACTTCTCGATTTCTTCACTGTCATTTGAGGGTGGAAAGTGGTGTTCCTGAGTTTCTTTTGTCTTCTGGATTTCTTTTATCTTCCACGATAAGAGTTCATTTTTGGCGGCACAAAAAATTAACTGAAATAATTGGTTGGGCTCCTTGTGTTAATATGGCTTCTTCAACACAACCTGTTTCTACGGATGAGCCGGTTGTTACTGTGGATTGGCTTTATGCCAACCTTAATGACCCTGACTTGAAGGTGCTGGATGCATCCTGGTACATGCCAAATGAGCAGAGGAACCCCATTCAAGAATATCAGGCTGCACACATTCCTGGCGCGCGTTTCTTTGACATAGACAGAATAGCAGATCAAACTACAGATTTGCCACATATGTTGCCATCAGAGAAAGCTTTTGCTGCAGCTGTGTCTGTTTTGAACATAGCAAACAAAGACCGAGTGGTTGTTTATGATGGCAAAGGAATATTTAGTGCACCTCGTGTCTGGTGGATGTTCCGAGTGTTTGGGCATGACCAAGTATGGGTATTAGATGGTGGACTGCCAAAATGGCGTGCATCTGGATATGACATCGAAACTGGTGCTTCTAGTGATAAATCCAGTGCTGCCACTGAAGCAGTAGAGAAAGTATTTCAGGGACAGTCAGTTGGCCCAATCACATTTCAGACTAAATTTCAGCCACATTTTGTTTGGTCCCTGGAACAGGTAAAGAGAAACATTGAGGAGAAAAGCTACCAGCACATAGACGCACGATCAAAGCCTAGGTTTGATGGAGTAGCACCAGAACCACGAGAGGGTATACAAAGTGGTCATATACCTGGAAGCAAGTGCATTCCTTTTTTCCAGTTGTTGGACACTTCACAGACACTGTTACCCGCAGATGAAATTAAGAAACGAATTGATCAAGAAGCTATCTCTTTGGATGGCCCCATCGTTACCTCATGTGGCACTGGCGTGACTGCTTGCATTCTTGTATTGGGCCTCCACCGTCTCGGAAAATCTGACATTGCTGTTTATGATGGGTCTTGGACTGAATGGGCATTGCAATCTGATACGGCTAAAGAAACTTCATGA 1164 0.4373 MSALVLLWDVPFYGDFIVWALISGLYILLLTSRFLHCHLRVESGVPEFLLSSGFLLSSTIRVHFWRHKKLTEIIGWAPCVNMASSTQPVSTDEPVVTVDWLYANLNDPDLKVLDASWYMPNEQRNPIQEYQAAHIPGARFFDIDRIADQTTDLPHMLPSEKAFAAAVSVLNIANKDRVVVYDGKGIFSAPRVWWMFRVFGHDQVWVLDGGLPKWRASGYDIETGASSDKSSAATEAVEKVFQGQSVGPITFQTKFQPHFVWSLEQVKRNIEEKSYQHIDARSKPRFDGVAPEPREGIQSGHIPGSKCIPFFQLLDTSQTLLPADEIKKRIDQEAISLDGPIVTSCGTGVTACILVLGLHRLGKSDIAVYDGSWTEWALQSDTAKETS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2279 387 CDD TST_Repeat_1 95 218 - -
Acco08g2279 387 CDD TST_Repeat_2 262 377 - -
Acco08g2279 387 PANTHER THIOSULFATE SULFERTANSFERASE 91 386 IPR045078 GO:0016783
Acco08g2279 387 FunFam Sulfurtransferase 88 230 - -
Acco08g2279 387 Gene3D - 257 386 IPR036873 -
Acco08g2279 387 SMART rhod_4 261 382 IPR001763 -
Acco08g2279 387 SMART rhod_4 96 220 IPR001763 -
Acco08g2279 387 ProSitePatterns Rhodanese signature 1. 130 141 IPR001307 GO:0004792
Acco08g2279 387 Gene3D - 89 234 IPR036873 -
Acco08g2279 387 ProSiteProfiles Rhodanese domain profile. 106 223 IPR001763 -
Acco08g2279 387 ProSiteProfiles Rhodanese domain profile. 271 385 IPR001763 -
Acco08g2279 387 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 93 226 IPR036873 -
Acco08g2279 387 Pfam Rhodanese-like domain 263 378 IPR001763 -
Acco08g2279 387 Pfam Rhodanese-like domain 97 216 IPR001763 -
Acco08g2279 387 FunFam Sulfurtransferase 256 387 - -
Acco08g2279 387 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 264 383 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2279 Acco-ChrAcco08 38402921 38409573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2279 85 386 Sulfurtransferasese or Rhodanese AT1G79230 73.443 3.63e-174 486