Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2278 ATGGCACTGACGTCCTACTTCAACTGGGAAAGTAATCTTCAAGCTGATCTGAACCTACGAGCGAGCCTCTTCAATGAAGAAACACCAGGAGAAGAAGTACTGGTTGCACCAGATTATAATAACCACCACCTCTTCCTTCCTTATTACTGTAACTCACTCGATCCAAACACGTCCTATCTCGATCCATATAGTAACTTGTTTTACCCTCATGAACTTGTTCCCTATGATCCCTTCTTGAATGAGAATCATTATGACAGTCTGCTTCCTTGTCCAAAACGGCGAAAGTGCTTGTCGTATGCCCAGAATTTGACAATGATGGACTTGATTGCACCAACGAATGATAGTTTCTTCGGTGGGAATAACATTGTTGTGCCCAAGGTTCCAGAGTTTTATTATGATGAGGTTGCAATGCTGGGGAATGGAGAGAGTACTGTGGCGGCGGCGGTGGTGGAAGGAGAGAGGAAGAAGAATGAGAAGACACTGCCGCCACGGCCCGTGGTGTCGGCACAGAGCGTGGCGGCGAGGGAGAGGAGGAGGAAGATAACAGAGAAGACACAAGACCTCGGAAAGCTGGTTCCTGGTGGCTCGAAGATGAACACAGCTGACATGCTTCATGCTGCTGCTAAGTATGTGAATTATTTGAAGGCTCAGGTTGACATGCTTCAACTCATGGACCCACTCAAGGAAGACAATAAGGTATTCACAGCAAATGAAGAAATGCAGAAGCTGCTTACTTGTCCACTTGTTGAAGAGAAGATGTACATGGAAGAGAAATGCTTTGTTCCAAAAGAGTTTGTCACCAACTTAACAAACCATAAAGACATTCAATCAATACCGTCCATCCTTAAAGATCTTAATCGGTTCATTTCGACAGACACAGAGATTGAAGAACAGTGA 897 0.4493 MALTSYFNWESNLQADLNLRASLFNEETPGEEVLVAPDYNNHHLFLPYYCNSLDPNTSYLDPYSNLFYPHELVPYDPFLNENHYDSLLPCPKRRKCLSYAQNLTMMDLIAPTNDSFFGGNNIVVPKVPEFYYDEVAMLGNGESTVAAAVVEGERKKNEKTLPPRPVVSAQSVAARERRRKITEKTQDLGKLVPGGSKMNTADMLHAAAKYVNYLKAQVDMLQLMDPLKEDNKVFTANEEMQKLLTCPLVEEKMYMEEKCFVPKEFVTNLTNHKDIQSIPSILKDLNRFISTDTEIEEQ 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2278 298 Gene3D - 168 227 IPR036638 GO:0046983
Acco08g2278 298 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 214 IPR011598 GO:0046983
Acco08g2278 298 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 168 261 IPR045843 GO:0003700|GO:0006355
Acco08g2278 298 SMART finulus 171 220 IPR011598 GO:0046983
Acco08g2278 298 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 222 IPR036638 GO:0046983
Acco08g2278 298 Pfam Helix-loop-helix DNA-binding domain 173 215 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2278 Acco-ChrAcco08 38400048 38402490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2278 55 290 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G34820 36.626 1.33e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco08g2278 HLH 9.5e-05 No_clan