Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2252 ATGGAACTGGGAAATGAGGAATTGCAGCCTGCACCACCATTAGTAATGCAGGAGCATCTGGATGCCATGCATGCCAGTAGAAGGTCTTCTGACCTTAATACATCAGATGTTAAGCCTGTTCATAATTACTCCATACAGACTGGTGAGGAATTCGCTCTCGAGTTTATGCGGGATCGGGTGAATCTTGGGAAGCCTGGATTTCCAAATGCTGGTGATTCCAATTGTGCATCAGGTTATATAAAATTGAAAGACATTTTAGGTATCAGTCATGCAGGATCTGAAAGTGGGTCAGAAATTTCTATGCTTTCTATAGTTGAAAAAGGTCCAAAAGAGCATGACAAAAAGAACTTATTGTTACATGAAGACAGAAGCAGTTATGGGTTGATTAGATCATTACCAAAAACCTCATTTAATCTGGACAATAATCAATTTGTGCATGGTTATACCTCTTCGGGAGGCTCTGATAACTCATCAAACACAACGAAAGTTCTTTGCAGCTTTGGTGGTAGAATATTACCTCGGCCAAGTGATGGAAAGCTGAGGTATGTTGGAGGTGAAACACGCATGATCCGTTTAGGAAAAGACATATCTTGGCAGGAGCTGATGCATAAAACATTATCAATCTATAATCAGGCTTATATACTGAAGTATCAACTTCCTGGGGAAGAGCTTGATGCTCTGGTATCAGTGTCTTCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCATTTGGATGATAGAGAAGGATTACAAAAGCTTAGGATGTTTTTGTTTTCAATGAATGATTTAGAGGATGCTCAATTTGGTCTGAATGGCATGAGTGATGATTCTGAGATCCAATTTGTCGTTGCTGTCAATGGCATGGACTTAGATTCAAGAAACAACTCAACACTTCTTGGCATGAGCTCTTCAGCAAATAACTTCAATGAATTGGACAGGCACAATATTGACAGAGAGACTAGTAGAATTGGCATAGGAACTGTAGGTACCATCAATGCCCCCTTGACCAGTAAAATTGATTCATCATTACCTATTCAGTCTTCCCATCCAATACCTCAAACTTCATCAAATGGTTATGACGGCTATCCCCAGTTTTATGGTGATCAGATGGTGCGCCTCGGGGAAACCAGTAGTCAATATCCAATTCACCAAGACCTTAATCTTTCCCAGAACCCTGCTCTTCGAGACGCCCATACTACTATTCTTCCTCATGGGATGATTAATCTACCTGGGATTTTAAATGAGGACCATTTATCTAGCGGATTGCCAGTACAGAATTCCAAAATACAGGCAATGCAGGCGACTAACATGGGCGGTAATTCAGTTCAACAAGGAAGTGACCCTGAGAAAGTCTTAGCCATGCAAGCACCATGTGCTGTTCTCTCTCAACCATTTGATGGGTGCTTGAAAAATAATTTTCCCGAGGCTACAGTAGCTGTTACTTTACAAGAGGGTCATATGCCTTCATCACCTTCAGCCAAAAAAGACCCACATCAGCATAGTCAAGAGGCCTGTTCTACAACTAGCAGTGCATTTGCTCCTGCTTGTGTTGATTCCCATTCTAAACGATATGATTTGAGTGGTCTTCACCCTCCTCCTCTTCCAAAGAGAGTTTACTATTCAGAAAGAACTCCCAGAGAGCAGGTTGAGACACTGAATCGTTCCTCAAAGTCAGATGATACCCAGGACTCTCAGGTTCTTGTGTCAGATTTACTTTCTGATACCAATCCACAAGGTTCAGTTGCAGAATCTGTTGACAACATGCACAATGGTAATCTATCCAACCGTCCTGAGGAATTAAACATTGCAGCAAAGCCCTTGCATGCAGATGGCCTCACTGCTGATAATGGATTTGCCAGACCACCAATACATGTAAATACTGAATTGAAGCAGGTACTGCCAAACAATAAGGCAAGTAAAGATGTGGTAAATGAGGATCAGTTTAGTAAGTTGGAAGCTGAAAGCCATCTTAAAGATAACCATGAGGAACCTCTGCTGGAAGAAAACAAAAACAGTACTACGCAGCACCTTCCTTCTGTTGATCATCACGATGATCCAGCATCTAAACCTCTAGAGATCAATTGGGGTGACACCTCTAGGAAGGATCCCAATGATGATTGTGTGGCACAGGCACTACCTGTTTCTTCTACTGAGAACCCAGCTGAGGATGTTCATCGAGATTTCCCATCCAATGTTGTTTCCAAGCAAGCACAAGGTGTTCTTATTGATATTGATGATCGGTTTCCACGTGAATGGCTTTCTGATATGTACTCTAAAGCAACACTTGCAGAATATTCATCTAGTCTGCTTCCCCTAACCAAGGATGGAGTTAGTGTAAGCATAGCCATGGAAAATCATGAACCTAAACCATGGTCATATTTTCATAAATTGGCACAAGATAATGTGTCTCTTATTGACCGGGACCATGATTTTTCACCTGCACCAGGAAATGAAGACGGGAATAATGAAATTCACCTGATTACACCTGTAATGAATGATGGAGTTTCTTTAGAACATGTGAAACCCCACCCTAACTTTGGTGAAGAAAATCAGAAAGACGTGCATGGAATGATTGAAAATGAAACAGTTGAACTGCAGTCAAATTATGGACATCGTTCTCAAGTGAAGGAAACTGAAAGCATGCAATTTGATGCTATAATGGGAAACATAAGAGCACAAGAATCAGAATATGAGAATGTCAATTTTGAAGAAAGAAATGGTAGTCTGCCACCACTTGATCATCCTTCAGGAAACGTTGATATCAGTACTTTGCAGGTCATAAAGAATGAAGATCTTGAAGAGTTGAAGGAACTAGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGCGGGGGACAGATGTTGCCATCAAAAGAATCAAGAAAAGCTGCTTCACTGGTCGATCATCTGAACAAGAAAGACTGACAGTAGAGTTTTGGCGGGAAGCCGACATACTTTCCAAGCTTCATCATCCCAATGTGGTGGCATTTTATGGTGTGGTCCAGGATGGACCAGGTGGAACAATGGCCGCTGTTACTGAATTTATGGTGAATGGTTCTCTTAGGCATGTATTACTTCGCAAGGATAGGTATCTTGATCGTAGGAAGAGGCTGATCATTGCCATGGATGCAGCCTTTGGAATGGAATATTTGCACTCAAAAAATATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACATGAGTGATCCTCAACGGCCAATCTGCAAGGTTGGAGACTTTGGGTTATCAAAAATCAAAAGAAATACCCTGGTCTCTGGTGGCGTGCGAGGGACCTTGCCATGGATGGCACCAGAGCTGCTGAATGGAAGCAGCAACAAAGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACGGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATTATAGGTGGGATAGTGAATAACACATTACGGCCAACAATCCCAAGTTACTGTGATTTGGAATGGAGAACACTGATGGAACAATGTTGGGCGCCAAATCCGGCAGCACGGCCATCCTTCACTGAAATTGCTAGCCGTTTGCGTGTGATGTCGGCGGCGGCCAGTCAATCCAAAGCACAAGGCCACAGGGCAGCTAAATGA 3651 0.421 MELGNEELQPAPPLVMQEHLDAMHASRRSSDLNTSDVKPVHNYSIQTGEEFALEFMRDRVNLGKPGFPNAGDSNCASGYIKLKDILGISHAGSESGSEISMLSIVEKGPKEHDKKNLLLHEDRSSYGLIRSLPKTSFNLDNNQFVHGYTSSGGSDNSSNTTKVLCSFGGRILPRPSDGKLRYVGGETRMIRLGKDISWQELMHKTLSIYNQAYILKYQLPGEELDALVSVSSDEDLQNMMEECNHLDDREGLQKLRMFLFSMNDLEDAQFGLNGMSDDSEIQFVVAVNGMDLDSRNNSTLLGMSSSANNFNELDRHNIDRETSRIGIGTVGTINAPLTSKIDSSLPIQSSHPIPQTSSNGYDGYPQFYGDQMVRLGETSSQYPIHQDLNLSQNPALRDAHTTILPHGMINLPGILNEDHLSSGLPVQNSKIQAMQATNMGGNSVQQGSDPEKVLAMQAPCAVLSQPFDGCLKNNFPEATVAVTLQEGHMPSSPSAKKDPHQHSQEACSTTSSAFAPACVDSHSKRYDLSGLHPPPLPKRVYYSERTPREQVETLNRSSKSDDTQDSQVLVSDLLSDTNPQGSVAESVDNMHNGNLSNRPEELNIAAKPLHADGLTADNGFARPPIHVNTELKQVLPNNKASKDVVNEDQFSKLEAESHLKDNHEEPLLEENKNSTTQHLPSVDHHDDPASKPLEINWGDTSRKDPNDDCVAQALPVSSTENPAEDVHRDFPSNVVSKQAQGVLIDIDDRFPREWLSDMYSKATLAEYSSSLLPLTKDGVSVSIAMENHEPKPWSYFHKLAQDNVSLIDRDHDFSPAPGNEDGNNEIHLITPVMNDGVSLEHVKPHPNFGEENQKDVHGMIENETVELQSNYGHRSQVKETESMQFDAIMGNIRAQESEYENVNFEERNGSLPPLDHPSGNVDISTLQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMAAVTEFMVNGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNMSDPQRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAASQSKAQGHRAAK 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2252 1216 PRINTS Tyrosine kinase catalytic domain signature 1016 1029 IPR001245 GO:0004672|GO:0006468
Acco08g2252 1216 PRINTS Tyrosine kinase catalytic domain signature 1124 1146 IPR001245 GO:0004672|GO:0006468
Acco08g2252 1216 PRINTS Tyrosine kinase catalytic domain signature 1053 1071 IPR001245 GO:0004672|GO:0006468
Acco08g2252 1216 PRINTS Tyrosine kinase catalytic domain signature 1168 1190 IPR001245 GO:0004672|GO:0006468
Acco08g2252 1216 CDD STKc_MAP3K-like 940 1197 - -
Acco08g2252 1216 Gene3D Phosphorylase Kinase; domain 1 927 1021 - -
Acco08g2252 1216 ProSiteProfiles Protein kinase domain profile. 934 1199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2252 1216 SUPERFAMILY Protein kinase-like (PK-like) 922 1196 IPR011009 -
Acco08g2252 1216 Gene3D - 179 262 - -
Acco08g2252 1216 SMART serkin_6 934 1200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2252 1216 MobiDBLite consensus disorder prediction 679 706 - -
Acco08g2252 1216 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 927 1021 - -
Acco08g2252 1216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1059 1071 IPR008271 GO:0004672|GO:0006468
Acco08g2252 1216 MobiDBLite consensus disorder prediction 671 707 - -
Acco08g2252 1216 MobiDBLite consensus disorder prediction 542 559 - -
Acco08g2252 1216 ProSitePatterns Protein kinases ATP-binding region signature. 940 965 IPR017441 GO:0005524
Acco08g2252 1216 SUPERFAMILY CAD & PB1 domains 176 266 - -
Acco08g2252 1216 SMART PB1_new 175 262 IPR000270 GO:0005515
Acco08g2252 1216 MobiDBLite consensus disorder prediction 525 566 - -
Acco08g2252 1216 Pfam PB1 domain 177 260 IPR000270 GO:0005515
Acco08g2252 1216 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 180 262 - -
Acco08g2252 1216 PANTHER SERINE-THREONINE PROTEIN KINASE 217 1198 - -
Acco08g2252 1216 Pfam Protein tyrosine and serine/threonine kinase 935 1197 IPR001245 GO:0004672|GO:0006468
Acco08g2252 1216 CDD PB1_UP2 164 260 - -
Acco08g2252 1216 MobiDBLite consensus disorder prediction 486 508 - -
Acco08g2252 1216 Gene3D Transferase(Phosphotransferase) domain 1 1022 1216 - -
Acco08g2252 1216 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1022 1214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2252 Acco-ChrAcco08 38115642 38122019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2252 33 645 MAP Kinase Kinase Kinase AT1G16270 37.768 2.10e-92 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Acco08g2252 PK_Tyr_Ser-Thr 1e-62 CL0016