Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2245 ATGAAGCCCTCTACCAGCAACAGCAGAAGGTCTCTAAGACTTCTTGAGAAGGAAGAGAGAAGACCTTCAAAGAAAACAAGCACGACAACTTCTCGAAGAAGCACAGCGAGAGCCGAGAAGAACGATTCTGACCGATCTGAATCTCCGGTTGCCAGAAAAATACTTGGCGAATTGGAACGGAGAATCGGAAAGGATGGATATTACTACGAATGCCTCTTATGTGAAGATGGAGGCAGACTGATTTGTTGTGAAAAGTGTCCAGGAACCTATCATCGGAAGTGCTTGGGTCTTCGGACTATTCCAAAGGGCGAATGGCTGTGCCCTACTTGTAGTGACAACGCTGCGTCATCAAAGGAAAGTTTTCTGAAAGATTTGGGTACCAAAAAACCTTTATCCTTCAAGAAAAAGAAAGCTGCTGCTTCTCCTTCTTCTTCTTCACCTTCTTCTTCTTCAAAGAGCGACTAG 465 0.4473 MKPSTSNSRRSLRLLEKEERRPSKKTSTTTSRRSTARAEKNDSDRSESPVARKILGELERRIGKDGYYYECLLCEDGGRLICCEKCPGTYHRKCLGLRTIPKGEWLCPTCSDNAASSKESFLKDLGTKKPLSFKKKKAAASPSSSSPSSSSKSD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2245 154 MobiDBLite consensus disorder prediction 35 50 - -
Acco08g2245 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 60 150 IPR013083 -
Acco08g2245 154 MobiDBLite consensus disorder prediction 138 154 - -
Acco08g2245 154 MobiDBLite consensus disorder prediction 11 26 - -
Acco08g2245 154 Pfam PHD-finger 71 111 IPR019787 -
Acco08g2245 154 PANTHER PHD FINGER PROTEIN 17 144 - -
Acco08g2245 154 SMART PHD_3 70 111 IPR001965 -
Acco08g2245 154 SUPERFAMILY FYVE/PHD zinc finger 57 111 IPR011011 -
Acco08g2245 154 MobiDBLite consensus disorder prediction 1 50 - -
Acco08g2245 154 MobiDBLite consensus disorder prediction 132 154 - -
Acco08g2245 154 ProSitePatterns Zinc finger PHD-type signature. 71 110 IPR019786 -
Acco08g2245 154 ProSiteProfiles Zinc finger PHD-type profile. 68 113 IPR019787 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2245 71 111 PHD Transcription Factor Family AT1G05380 56.098 2.02e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Acco08g2245 PHD 5.7e-08 CL0390