Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2218 ATGCAGCTTCCTTCGCGCTTGATGAAGTCCCTCTCAGTTTCTTCTTTACCAGCTACACCTACACTTCAAGACATTGCTCACCATCAACCAAAAGGTATTGCAAAGGTTGTTCTGAAAAAGGGGAAGTCACAACTCTTTAAGGATGGGAACCCAATGGTGTACAGTGGAGCTGTTGATAGAATAATTGGAAGACCACCTCCTAAGACTGGAGACATTGTTCTGGTGGCTGATGGGACTGAGAAGCCAATTGGGTGGGGCATGTACAACTCAGTTTCTATGTTCTGTGTTCGGCTCATGCAGTTTGACGACGAAGCTTCTAGTGACTCATCGTGTGCTTTGAACATCAAGAATTTGCTTGCAACAAGAATAGCTTCAGCTATTGAATTGCGTAAAAGGTTGGGTCTTCCTTCAGTCCAGACAAATGCATATCGTCTAATCAATAGTGAGGGAGACAGATTATCAGGATTGATCATTGACATCTTTGGAGATGTAGCTGTAATAGCATCATCTGCTGCTTGGGTTGAGAAGTACAGAGCAGACATAGAGGCATGTGTTAGTAAAATTGACGATATCAATCACATAAATTGGCGACCATCTGTTGATATCTTAAAAGAAGAAGGCATGGATGTATCAGATTCGAAGGAAACTCATTCATCTACTGGTCCTGAAAGGTCAAAGATCATGGAAAATGGAATTTCATACGCAATTTCTCTCAAGGGTCAGAAGACAGGATTTTATGCTGATCAACGTGAGAACCGCCATTTTGTATCAAGAATTTCAGATGGTCAAAAGGTTCTTGATATTTGCTGCTATAGTGGAGGTTTTGCACTAAATGCCTTGCGTGGAGGTGCTGTAAATGTTACTGGTGTTGACACATCACTGGCGGCTTTGGAGCTTGCTAAAGAAAATGTCGTGCTTAACAATATGGATCCTGAAAGAATATCATTTTTGAGAGAAGATGCAACGGAGTTCATGAAGAGTGCTCTCTCAAGAAATGAGTCATGGGATATTGTCATCATTGACCCTCCTAAACTGGCACCATCAAAAAAGGTTCTGCACAGTGCATCAGGCATGTACAGAAATTTGAATTCATTGGCTATGAAACTAACAAAAAGAGGCGGCCTTCTGATGACTTGTTCTTGTTCAGGAGCTGTAGCCCAAAGTGGAATATTTTTGCGGATTCTTCAGGGCGCAGCATCAATGGCAGGGAGAAAAATCACGGTTCTAAGACAGGCTGGAGCAGCTTGTGATCATCCTGTGGATCCATCCTACCCAGAAGGTGCATACCTATCCAACATCCTACTACGAGTGCTATGA 1317 0.426 MQLPSRLMKSLSVSSLPATPTLQDIAHHQPKGIAKVVLKKGKSQLFKDGNPMVYSGAVDRIIGRPPPKTGDIVLVADGTEKPIGWGMYNSVSMFCVRLMQFDDEASSDSSCALNIKNLLATRIASAIELRKRLGLPSVQTNAYRLINSEGDRLSGLIIDIFGDVAVIASSAAWVEKYRADIEACVSKIDDINHINWRPSVDILKEEGMDVSDSKETHSSTGPERSKIMENGISYAISLKGQKTGFYADQRENRHFVSRISDGQKVLDICCYSGGFALNALRGGAVNVTGVDTSLAALELAKENVVLNNMDPERISFLREDATEFMKSALSRNESWDIVIIDPPKLAPSKKVLHSASGMYRNLNSLAMKLTKRGGLLMTCSCSGAVAQSGIFLRILQGAASMAGRKITVLRQAGAACDHPVDPSYPEGAYLSNILLRVL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2218 438 PANTHER RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE 21 437 - -
Acco08g2218 438 CDD PUA_RlmI 34 104 IPR041532 GO:0003723
Acco08g2218 438 Pfam S-adenosylmethionine-dependent methyltransferase 219 392 IPR019614 GO:0008168
Acco08g2218 438 SMART pua_5 34 128 IPR002478 GO:0003723
Acco08g2218 438 Pfam PUA-like domain 36 100 IPR041532 GO:0003723
Acco08g2218 438 CDD AdoMet_MTases 264 379 - -
Acco08g2218 438 Gene3D RNA methyltransferase domain (HRMD) like 115 218 - -
Acco08g2218 438 Gene3D Vaccinia Virus protein VP39 225 438 IPR029063 -
Acco08g2218 438 CDD RlmI_M_like 117 212 - -
Acco08g2218 438 SUPERFAMILY PUA domain-like 35 104 IPR015947 -
Acco08g2218 438 Gene3D PUA domain 33 104 IPR036974 GO:0003723
Acco08g2218 438 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 120 433 IPR029063 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g2218 08 37641825 37648102 Acco08g2218 08 37641825 37648102 ECH