Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2216 ATGTTCCCTCCAAAGAAGGCCTCATCTATGAATTCTCAAGACAGAGGCATGTGTGTTCAACCTGACTCTGGCCTCGTCCTCACCACTGATCCTAAGCCTCGCCTTCGTTGGACCGTCGAACTCCATGAACGCTTCGTCGCTGCCGTCACCCAGCTCGGTGGCCCTGACAAGGCAACACCTAAGACGATCATGAGGGTGATGGGTGTGAATGGTCTTACGCTTTACCACCTAAAGAGTCACCTTCAGAAATTTAGGCTTGGAAAGCAGCCCCACAAGGACTTCAACGATCATTCCATCAAGAATGCATCCGCTTTAGAACTTCAACGAAATTCTGCCTCCTCTTCCGCCATGATCGGTCGCAATATGAACGAGATGCAAATGGAGGTGCAGAGACGACTTCACGAACAACTAGAGGTTCAGAAACATCTTCAGCTGAGGATTGAAGCACAAGGGAAATACATGCAGAGCATATTAGAGAAGGCTTATCAAACACTTGCAGGTGAAAACTTGAAGAACAATAATATTAATGGATCTCATCATCTTCATCAAGCCAATATGATCCCTCCTCAAGATTTCACTTCTTCCTTCCCTCTCAACCCTAATTTCCCTTCTTTTCAAGATGAGCTCAACATCTACGGCGGTGGCGATGACCAGCTCGATCATAATCTTCATCATCACCAGTTCATGCCAAATAGCAGCAGCAACACAGAAAATCTCTGTGTGGGGATGAACAATAATAATAATAAGAACAAGAGGCCTTTGATTTGGAACCATGAAGATCTAAGGCTTCATCATCAAGATCATCATCTGGGAACTGCTTCTTCTTCTTTGTGTCTTGATACTGATCCTTTTAAGGATGTTTCATTGGACAGAATCACAAGTAGTTCTGAGAATAACTACGTTAATATTGATCCTATTTCAGACATGTATGACACTAAGCCTTTACTTCATCATCAAGAGGACAATTTAGGGGATGCTAGTGCCACCGATAATAAGAAGCTTATTGAAAGGCCTTCACCAAAAAGGGCACATTCCCTTCAACCAGCAGATCAAAGGATGAGTCCTATGATTAGCACCGGTACACCATTTTAG 1092 0.4386 MFPPKKASSMNSQDRGMCVQPDSGLVLTTDPKPRLRWTVELHERFVAAVTQLGGPDKATPKTIMRVMGVNGLTLYHLKSHLQKFRLGKQPHKDFNDHSIKNASALELQRNSASSSAMIGRNMNEMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENLKNNNINGSHHLHQANMIPPQDFTSSFPLNPNFPSFQDELNIYGGGDDQLDHNLHHHQFMPNSSSNTENLCVGMNNNNNKNKRPLIWNHEDLRLHHQDHHLGTASSSLCLDTDPFKDVSLDRITSSSENNYVNIDPISDMYDTKPLLHHQEDNLGDASATDNKKLIERPSPKRAHSLQPADQRMSPMISTGTPF 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2216 363 NCBIfam myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Acco08g2216 363 Pfam MYB-CC type transfactor, LHEQLE motif 125 164 IPR025756 -
Acco08g2216 363 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Acco08g2216 363 MobiDBLite consensus disorder prediction 334 363 - -
Acco08g2216 363 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Acco08g2216 363 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Acco08g2216 363 FunFam Myb family transcription factor 31 89 - -
Acco08g2216 363 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 250 IPR044848 GO:0003700
Acco08g2216 363 Gene3D - 31 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2216 Acco-ChrAcco08 37615654 37617849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2216 1 343 G2-like Transcription Factor Family AT1G79430 54.144 1.88e-107 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco08g2216 Myb_DNA-binding 6.4e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g2216 08 37615654 37617849 Acco08g2216 08 37615654 37617849 ECH