Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2214 ATGGCTTCAACTAGTTTTTCTCTCCCACCTGGATTTCGGTTCCATCCAACAGATGAAGAACTTGTTTCTTACTACCTAGAAAGAAAGATAACAGGTCGCTCTATAGAGCTTCATATAATCCCTGAAGTTGATCTATACAAATATGAGCATTGGGATTTGCCAGAGAAGTCATGGTTGGCAAGTAAAGATATGGAGTGGTACTTCTACAGTAGAAGGGATAGAAAGTACCCAAATGGATCAAGAACTAATAGGGCAACAAGAGCTGGTTATTGGAAAGCTACAGGGAGAGATAGGCCTGTGACTGTGAGTTCTCATCATCAAAAGCCATCTCTTGGGGTGAAGAAGTCGTTGGTGTATTATAAAGGTCGAGCTCCTCATGGCATCAGAACCAACTGGGTCATGCACGAGTATCGCCTCATTGATTCGAAACCTCCAAGTGTTTTCTCATTTTTAAGGGATTCTTACTCATTGTGTCGAGTTTTCAAGAAGACGATCCAAACCTCGGAATCACCTAAAGAAGACAAAACTACGGAAGCAAAGAAGGAAACTTTAGGACCAGAAAAGGAAGACGGCAATAAGATTTTAAATCATGATCTTGCTACTAATAAAGTTCCTAATTGTGATGCTTCTTGTTCGGATCTCACTCAAGGAACACAACACACTGAAACTGGTATGTTAGATGATTTTCAAGCACAGTTCGCTTGTGATGAAGCAAACAGTGAAGTTAATAATACATATTCCCTGGGCATGATGGAGGACTCATCGAATCTGTTTCAGGTGCTTCCTTTAGTTTAA 795 0.405 MASTSFSLPPGFRFHPTDEELVSYYLERKITGRSIELHIIPEVDLYKYEHWDLPEKSWLASKDMEWYFYSRRDRKYPNGSRTNRATRAGYWKATGRDRPVTVSSHHQKPSLGVKKSLVYYKGRAPHGIRTNWVMHEYRLIDSKPPSVFSFLRDSYSLCRVFKKTIQTSESPKEDKTTEAKKETLGPEKEDGNKILNHDLATNKVPNCDASCSDLTQGTQHTETGMLDDFQAQFACDEANSEVNNTYSLGMMEDSSNLFQVLPLV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2214 264 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 213 - -
Acco08g2214 264 FunFam Nac domain-containing protein 86 17 166 - -
Acco08g2214 264 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Acco08g2214 264 MobiDBLite consensus disorder prediction 167 191 - -
Acco08g2214 264 Gene3D NAC domain 17 167 IPR036093 GO:0003677|GO:0006355
Acco08g2214 264 ProSiteProfiles NAC domain profile. 8 163 IPR003441 GO:0003677|GO:0006355
Acco08g2214 264 SUPERFAMILY NAC domain 5 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2214 Acco-ChrAcco08 37545138 37547663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2214 6 234 NAC Transcription Factor Family AT1G54330 56.067 1.47e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco08g2214 NAM 1.1e-36 No_clan