Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2185 ATGCCAAACCAAGCTGCAAAAAAGACTTTTGAATCCCAGAAATTAGAACTACCAAGCAAGAAGATGATGTCTGCAAATCCTGATCCTCAAGCCACCTCATCTACAGTAAACGCAGCAATCATAAAGAGTCTTCCTTCCCCTTTGAGGACCAATAACCATGGCTATGGCAGTGGCAATAGTTCGCGTAGCGACAGCTTAGAAAGCACAAGTACACACATCAAGCCACATACCGGTGGTGATGTAAGGTGGGATGCCATTCACATGGTTTCTAGAGGAGGAGGCCCTCTTGATCTTAGCCATTTTCGGTTTCTCAAGCGAGTCGGCTATGGGGATATTGGGTGTGTGTATCTTGTAGAACTCAGAAGGACCAGGACTTGTTTTGCCATGAAAGTGATGAACAAGGAAGCTCTTATAAGTAGGAATAAACTACTAAGAGCACAGACAGAGAGGGAGATTCTTCAACTTCTTGACCACCCTTTCTTACCTACTCTGTATTCTTATTTTGAAACTGACAAGCATTCTTGTTTGGTCATGGAGTTCTGCAATGGAGGTAACCTCCACTCTCTTCGGCAGAAGCAGCCAAACCATCATTTCACAGAAGAAGCAGCACGGTTTTATGCTTCAGAGATATTGTTAGCTATTGAGTACCTGCATATGCTAGGCATAGTGTACAGAGACTTGAAGCCAGAGAATGTCTTAGTCAGAGATGAAGGCCACATAATGCTCTCGGATTTCGATCTATCCCTTCGCTGCTCGGTCAATCCAACACTCATCAAGTCTTCATCTGTCCATGCAAGTGGTAGCAGCAATAGCAGTAGTAGTGGTTCTGGGGTCATTTTGGAAGACCATCAAACAGGGCAGACTAGTACTCAGCCATCAACTTTCTTCCCACGCATTTTACCAACAAAGAAAAATCGAAAATCAAAGTCAGATTTCGGCCTCCTAAACGGAGGAACAGCCCTCCCTGAATTCATGGCAGAGCCTTCAGATGTGAGGTCAATGTCCTTTGTAGGGACACATGAATACCTTGCACCTGAAATCATCAGAGGAGAAGGTCATGGCAGTGCAGTAGATTGGTGGACTTTTGGGATCTTTTTGTACGAGCTTTTACTTGGGACAACGCCTTTCAAAGGCGCCGGGAATCGGGCTACACTTTTCAATGTTGTAGGACAGCCCTTAAGGTTCCCAGAAACTCCTCAGATAAGTTCGACAGCAAAAGACCTTATCAAAGGATTGCTCGTGAAGGAACCTCCAAAGCGAATTGCATATATAAGGGGTGCCACAGAAATAAAACAGCACCCATTTTTCGAGGGAATGAACTGGGCACTAGTCAGAAGCGCCATGCCTCCTCATATACCAGATCCTGTAGATTTTTCCAAGTATGCTAGCAAAGATTCAGCAGACAAGGTGATAGATAAGGCAAAAGATAAAAATGGCCCACATGGTTCATCTGATTCTTCTTACATAGATTTTGAATATTTCTAA 1485 0.4411 MPNQAAKKTFESQKLELPSKKMMSANPDPQATSSTVNAAIIKSLPSPLRTNNHGYGSGNSSRSDSLESTSTHIKPHTGGDVRWDAIHMVSRGGGPLDLSHFRFLKRVGYGDIGCVYLVELRRTRTCFAMKVMNKEALISRNKLLRAQTEREILQLLDHPFLPTLYSYFETDKHSCLVMEFCNGGNLHSLRQKQPNHHFTEEAARFYASEILLAIEYLHMLGIVYRDLKPENVLVRDEGHIMLSDFDLSLRCSVNPTLIKSSSVHASGSSNSSSSGSGVILEDHQTGQTSTQPSTFFPRILPTKKNRKSKSDFGLLNGGTALPEFMAEPSDVRSMSFVGTHEYLAPEIIRGEGHGSAVDWWTFGIFLYELLLGTTPFKGAGNRATLFNVVGQPLRFPETPQISSTAKDLIKGLLVKEPPKRIAYIRGATEIKQHPFFEGMNWALVRSAMPPHIPDPVDFSKYASKDSADKVIDKAKDKNGPHGSSDSSYIDFEYF 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2185 494 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Acco08g2185 494 Gene3D Phosphorylase Kinase; domain 1 99 180 - -
Acco08g2185 494 ProSiteProfiles Protein kinase domain profile. 101 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2185 494 SUPERFAMILY Protein kinase-like (PK-like) 83 459 IPR011009 -
Acco08g2185 494 MobiDBLite consensus disorder prediction 261 300 - -
Acco08g2185 494 MobiDBLite consensus disorder prediction 1 33 - -
Acco08g2185 494 MobiDBLite consensus disorder prediction 472 494 - -
Acco08g2185 494 FunFam Serine/threonine-protein kinase D6PK-like 99 184 - -
Acco08g2185 494 MobiDBLite consensus disorder prediction 47 76 - -
Acco08g2185 494 MobiDBLite consensus disorder prediction 261 298 - -
Acco08g2185 494 CDD STKc_phototropin_like 99 457 - -
Acco08g2185 494 FunFam serine/threonine-protein kinase D6PK-like 185 252 - -
Acco08g2185 494 Pfam Protein kinase domain 102 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2185 494 Pfam Protein kinase domain 323 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2185 494 PANTHER FLIPPASE KINASE 1-RELATED 50 462 - -
Acco08g2185 494 Gene3D Transferase(Phosphotransferase) domain 1 311 454 - -
Acco08g2185 494 SMART serkin_6 101 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2185 494 FunFam Serine/threonine-protein kinase AGC1-7 329 454 - -
Acco08g2185 494 MobiDBLite consensus disorder prediction 47 75 - -
Acco08g2185 494 Gene3D Transferase(Phosphotransferase) domain 1 181 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2185 Acco-ChrAcco08 37219736 37221772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2185 66 494 AGC Kinase Gene Family AT1G79250 71.429 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco08g2185 Pkinase 2.8e-38 CL0016