Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2153 ATGAGTTTTTTGGGCTGCAAGGATCATCGTCGTCGTTGTCATCATCAAGACCTTAATATTAACGGTGATGACATGCACAGCAACAACCATACTTCCACAAGCCGTTCCTCTGACTCCGGTGACCCTTCCCACGACTCGAAATGGGTGCCTAAGCTCCTCACCGAGTGTGCTAAAGCCATCTCCGAAGGCGACTCCCCCAAAATCCATCATCTTCTTTGGATGCTCAACGAGCTCGCCTCGCCTTACGGCGATTGCGAACAGAAATTGGCGTCCTACTTCCTCCAAGCCCTATTTTGCAAAGCCACCGACTCCGGCCCACGGTGCTACCAGACTCTCTCCTCCATCGCCGACAAATCTCACTCATTCGATTCCTCTAGAAAGCTCATCCTCAAGTTTCAGGAGGTCAGCCCGTGGACAACCTTCGGACATGTCGCTTCCAACGGTGCTATTCTAGAAGCCCTCGACGGCGAGACCAAGCTTCACATAATTGACATAAGCAATACTCTCTGCACGCAGTGGCCTACCCTATTGGAAGCCCTGGCCACCCGAAACGACGAAACTCCTCACCTTAAGCTCACCGTGGTTTTGACGGGCACCACCGGAAGCGTAGGGGCGGGGTCGGTGATGAAGGAAGTAAGGCAAAGGATGGAGAAGTTCGCGAGGCTAATGGGAGTGCCGTTTGAACTCAAGATGATAACTGGACTGAATCATCTGGGAGAGCTGACCAAGGAGGGCTTGGGAGTGCAAAAGGAGGAGGCCGTGGCGGTGAACTGCGTTGGAGCGCTAAGAAGAGTGAGAGTGGAAGAGCGAGGAAGAGTGATCGAAATGTTCTCATCGCTGAATCCGAGGGTGGTGACGGTAGTGGAGGAGGAAGCCGATTTCTCGAGCAATAGGAATGAGTTTGTGAAGGGGTTTGAAGAGTGCTTGAGGTTCTTCTCACTATACTTTGAGACTCTAGAGGAGAGCTTTGGCGCTACGAGTAACGAGAGATTGATGCTCGAGAGAGAGTGTTCGAGGAGCATAGTTAGGGTTTTGGCATGCGGCGACGAAGACGAGGGTGGAGGAGATGATCATCATCATTATCATCATGAAGAATGTGAGAGAAGGGAAAGAGGGAGGCAGTGGAGTGAGAGGATGAGGCATGAGTTTCGGGCGATGCCGTTCAGCGACGATGTTTTGGATGATGTCAAGGCATTATTGAAGAGGTACAGACCGGGGTGGTCGCTGGCGTCGGCGCCGCCTCCATCAGAAGACGGAATTTACTTGAATTGGAAGGATGAGCATGTGGTTTGGGCCTCCACATGGAAACCCTAG 1314 0.5228 MSFLGCKDHRRRCHHQDLNINGDDMHSNNHTSTSRSSDSGDPSHDSKWVPKLLTECAKAISEGDSPKIHHLLWMLNELASPYGDCEQKLASYFLQALFCKATDSGPRCYQTLSSIADKSHSFDSSRKLILKFQEVSPWTTFGHVASNGAILEALDGETKLHIIDISNTLCTQWPTLLEALATRNDETPHLKLTVVLTGTTGSVGAGSVMKEVRQRMEKFARLMGVPFELKMITGLNHLGELTKEGLGVQKEEAVAVNCVGALRRVRVEERGRVIEMFSSLNPRVVTVVEEEADFSSNRNEFVKGFEECLRFFSLYFETLEESFGATSNERLMLERECSRSIVRVLACGDEDEGGGDDHHHYHHEECERRERGRQWSERMRHEFRAMPFSDDVLDDVKALLKRYRPGWSLASAPPPSEDGIYLNWKDEHVVWASTWKP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2153 437 Pfam GRAS domain family 51 436 IPR005202 -
Acco08g2153 437 ProSiteProfiles GRAS family profile. 40 436 IPR005202 -
Acco08g2153 437 MobiDBLite consensus disorder prediction 17 46 - -
Acco08g2153 437 MobiDBLite consensus disorder prediction 22 39 - -
Acco08g2153 437 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 49 429 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2153 Acco-ChrAcco08 36674874 36676187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2153 32 437 GRAS Transcription Factor Family AT4G37650 52.143 7.46e-143 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Acco08g2153 GRAS 5.1e-91 CL0063