Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2130 ATGAACAAGATTTTGAAAGAGGGATGGAGGGTCGAGAAAAATGAGGTAAGGGCAACAAAGAAGCAGTTATCCTTGAACCTTCTCATGGAAAAGCAGAGAAACCAAAATCACCACCACCACCGTAACCCCGACAACAAGAACCGCCACCGCTGCCTCCGCCACCGTCAAACTTGGGGCACGTGGGAGGAACTTCTCCTGGCCTCTGCCGTCAAACTCCATGGCTCTAACGACTGGGACACCGTCGCCATGGAGATCCAGAACCGCACCAACCTCCCTCACCTTCTCACCACCGCTCGCAACTGCGAGCAGAAATTCCTCGATCTCAAACGCCGATTCACCGCCCAATGCAACGACGCCGTTCGGGACCCTCCGGAGAAAGGCGCTCCCGACGGTGACGTCGTCGATCACGTTCCCTGGCTCGATGAATTGCGTAAGCTCCGGGTAGCTGAGCTCCGGCGAGAGGTCCAACATCACGACGTCTCCATTCTGTCGTTGCAGCACAAGGTGAAGAGATTAGAGGAAGAGAGAGAAAAAAGCTTGATGGAAAATGAAGCAGAAGGAGATGAGAAACCAGATCTGGAAAACTCCGGGAAACCGGAAAACGACGACAAAAACGGAGGAGGAGAAGGAAAACCTGAACCGGCAAATTGTGAACCGGGGAGGCGGGTCAATGACGATGGAAATGATAATAGTAACGATAATGATAACAACAATAACAGCAGTAATAATAAGCTTCCAGCAGGGGACGACTACGACCGGGACAACCAATCAGTTAATGAGTCTAATTCGACCGGTTCAAGATCCGCGGGAGAGAAAACCGGGGAGGAAGATGTGAAGCCTGAACCGCCTCCGGCTCATTCCGGTCCGAAGAAACCTGATCCGAGTGAGGATAAAAAAGTCGAGGACTCGTCCGAGTTGAGAGACTCGGTGGCCCACTCGGAAGGGGGAGGGACGAGGGAGAGCGGCGAGGTGCAGAGCTCGGCGAGCTTAACGAGGAAGAGGCAATCTCGAAAGAGGAAGAAGGTCTCCAGCGGCGGAGGCAACGGCGAGGAGGAGGCGCCGGAGAACGACGAGGTGGCGGCGAAATCACAACCGTTGGTTTGCCTCTTGGAGCTGATCAAAGGACATGAGAACAGCTCGTTGTTCGAGCGCCGTCTTGAAAGCCAGGAGGAATGGGAAAAATACAAAAGCATGGTACGTGAGCACGTGGACTTAGAAATCATCCAAACGCGCCTTCGAAATGGCTACTACTCCTCCGGCGCCACCGCCTTCTTCCGGGACCTCTTCCTCCTCTTCACCAACTTCACCGTCTTCTTCCCCACCCATTCCGTCCACTCACGCGCCGCCACCCAGCTCTGCGACCTCGTCTCCGACAAGATGAAGAACTTCACCCAACCCGGCCGCAATAACACCCCTCCTTCTGTACGGCCACCTCCACCGCAGCCCCCACCGTCATCCCCAGTCAAGCCTGATTCTTCTCATAATTTGCTTTCCAAGCACAAAGCTTCCGCTCCCATTCTGGTTTGCCGGAAACGCAGTTTCATGTCCGGTAAACCTTCCTCTGCTTCCACCTTTGGCCATAATAATAATAAGGGTACTACTGACCGGTTAAGCAGCGAGAAGAAACCGCCACCTCCGCCGCAGAAGAGGCCACCGTCGGTTTCTGATGATTCAGATGAAGAAACTCCTTCTCCTCGTCCTACTGCTCCTCCTCCTTCTCTGCAGCCTAAGTCGAAGGAGAAGCCGGTGACCGGAGCAAGAAGCATGAGAAGAAGCAATAAAAACCTCAGTGGGATCATCCAGAACAAGAAACTTCCGTCCAGTGGTAAAGCAGATCCTCCCAAATCAGATCAGAAAACCAAAACATCAGCAGCCGTAGAAGCAGAAGAACAAACAGCATCGGCATCCGACAAAAAGAGAAGCGCTGCCGCAGATTTCTTGAAAAGGATAAAGAAAAACAGCCCCAGCCAGGCAATTATGAAGAGCGGCGGCGGCGGTGGAAAAGATCAGAAGAAGGTAATGGGTAGCGGCGGCGGAAAGGGCGGCGATCATCAGAAAGGTAAGGACAGAACATTGAGGCATGGTGGCAGATCAGGGGAGAGGAATAGGGGTAGTGATCAGAATTCAGAGAATATGAATAGTACTCAGTCAAAAAGAAGTGTAGGGAGGCCACCGAAGAAAGTAGCAGAGAGTAATAACAGTAACAATAATAATGTTTCAGGTTCTGGTAAACGTGGAAGAGAAAGTGGTGGTAGAAGTGGGAAGGATAAAAGGCCTAAGAAACGAAGTAGAAAGTAA 2298 0.5222 MNKILKEGWRVEKNEVRATKKQLSLNLLMEKQRNQNHHHHRNPDNKNRHRCLRHRQTWGTWEELLLASAVKLHGSNDWDTVAMEIQNRTNLPHLLTTARNCEQKFLDLKRRFTAQCNDAVRDPPEKGAPDGDVVDHVPWLDELRKLRVAELRREVQHHDVSILSLQHKVKRLEEEREKSLMENEAEGDEKPDLENSGKPENDDKNGGGEGKPEPANCEPGRRVNDDGNDNSNDNDNNNNSSNNKLPAGDDYDRDNQSVNESNSTGSRSAGEKTGEEDVKPEPPPAHSGPKKPDPSEDKKVEDSSELRDSVAHSEGGGTRESGEVQSSASLTRKRQSRKRKKVSSGGGNGEEEAPENDEVAAKSQPLVCLLELIKGHENSSLFERRLESQEEWEKYKSMVREHVDLEIIQTRLRNGYYSSGATAFFRDLFLLFTNFTVFFPTHSVHSRAATQLCDLVSDKMKNFTQPGRNNTPPSVRPPPPQPPPSSPVKPDSSHNLLSKHKASAPILVCRKRSFMSGKPSSASTFGHNNNKGTTDRLSSEKKPPPPPQKRPPSVSDDSDEETPSPRPTAPPPSLQPKSKEKPVTGARSMRRSNKNLSGIIQNKKLPSSGKADPPKSDQKTKTSAAVEAEEQTASASDKKRSAAADFLKRIKKNSPSQAIMKSGGGGGKDQKKVMGSGGGKGGDHQKGKDRTLRHGGRSGERNRGSDQNSENMNSTQSKRSVGRPPKKVAESNNSNNNNVSGSGKRGRESGGRSGKDKRPKKRSRK 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2130 765 MobiDBLite consensus disorder prediction 682 704 - -
Acco08g2130 765 MobiDBLite consensus disorder prediction 230 246 - -
Acco08g2130 765 MobiDBLite consensus disorder prediction 588 604 - -
Acco08g2130 765 MobiDBLite consensus disorder prediction 461 496 - -
Acco08g2130 765 MobiDBLite consensus disorder prediction 174 360 - -
Acco08g2130 765 ProSiteProfiles Bromodomain profile. 374 446 IPR001487 GO:0005515
Acco08g2130 765 Coils Coil 162 189 - -
Acco08g2130 765 MobiDBLite consensus disorder prediction 471 489 - -
Acco08g2130 765 SMART bromo_6 166 465 IPR001487 GO:0005515
Acco08g2130 765 MobiDBLite consensus disorder prediction 516 533 - -
Acco08g2130 765 MobiDBLite consensus disorder prediction 270 314 - -
Acco08g2130 765 Pfam Bromodomain 370 450 IPR001487 GO:0005515
Acco08g2130 765 SMART sant 54 111 IPR001005 -
Acco08g2130 765 MobiDBLite consensus disorder prediction 632 647 - -
Acco08g2130 765 MobiDBLite consensus disorder prediction 516 765 - -
Acco08g2130 765 SUPERFAMILY Homeodomain-like 53 90 IPR009057 -
Acco08g2130 765 Gene3D - 324 470 IPR036427 GO:0005515
Acco08g2130 765 Pfam Myb-like DNA-binding domain 55 89 IPR001005 -
Acco08g2130 765 CDD SANT 57 109 IPR001005 -
Acco08g2130 765 SUPERFAMILY Bromodomain 362 465 IPR036427 GO:0005515
Acco08g2130 765 MobiDBLite consensus disorder prediction 705 744 - -
Acco08g2130 765 CDD Bromodomain 369 452 - -
Acco08g2130 765 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 40 765 - -
Acco08g2130 765 MobiDBLite consensus disorder prediction 174 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2130 Acco-ChrAcco08 36301083 36306725 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco08g2130 Bromodomain 2.9e-09 No_clan