Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2124 ATGTGGAGATTTAAGCCATTCATGCAAAAAGAGCCAGCTGGGCTCGAAGGCCGTTCTATTGATGTTGGTAATCTTAAAGTAAATGTCCTGAAGGCCATTGCTGAAGGGGGTTTCTCTTGTGTCTACTTGGTTCGTGATGCTGTACACATGTCAAAACAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCACTTGAATTAGTAAAGAAGGAGATCTCAGTCATGAAGTCATTGAAAGGGCATCCTAATGTTGTCACACTTTATGCTCATGCAGTCCTTGATATGGGTAGGACAAAAGAAGCATTCCTTGTTATGGAATTTTGTGAGAAGTCTCTTGCTAATGTGCTGGAGAGCCGAGGATCTGGTTATTTTGATGAGAAGCAGGTTCTTCAAATCTTCAGGGATGTATGTAATGCAGTTTTTGCTATGCACTGCCAATCCCCACCTATTGCTCACCGGGACTTGAAAGCTGAGAATCTCTTATTAGGCCCCGATGGTTTATGGAAATTATGTGATTTTGGGAGTACTTCTACCAATCACAAGCGATTTGAGAAAGCTGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAGCACACGACTCCTGCCTACAGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAAGTCATTAATGAGAAAGTGGACATATGGGCATTGGGGTGTCTCCTTTTCCGTATATGCTACTTCAAAAGTGCATTTGATGGTGAATCAAAGTTACAAGTCTTGAATGGAAACTATCGCATTCCTGATTTGCCAAAATACAGTTCATCCATCATGGACCTAATCAGAGATATGCTCCAGGCCAGACCAGACGACAGACCAGATATCACGCAGGTCTGGTTTTGTGTCAATGAGCAGTTCCCTATAGATCTGCAGAAGTCATTACCTGATAGACCACCTGAATTGCCGTCTTCCAACAATCACGAAGGTTCTGCTAAGCCTGCAACTCAATCAACTCCAATGCCCCGTCGGAGTCCACCTCCTCCACCTTCATCTGGAGAAATAAAAAGTTCATCACAGTCATCCCATTCTTCTATAGGAGGGGGAAGTGGAGGGCAGCTTGGCGCTTTTTGGTCTACTATGCATGCAAATGACTCATCGGCCTCAGAGGTTAAGAGCAAACCAATATTTGATGAAGAACCATCTAACCATCACGCCTCAGCAAAACATGATAGAATTCGTCCAGACAGTAACCAATTACCCAAAAATGTTGGTGGTAGAAAAGTGGATATTGGACAGCTACAAAATGTGAAAAACAGTGAACATGGGAAATCATACAAACCTGATACTGGATCTTCCAAGGACTTTGAAATAAAATTTTACCAGGACACACATCTTGGTGGTGAGAGGCGGGGTTCTTCAAGTAAGGAGAACGCAGCTTCTTTTCAAGACAAGGCTTTTGACTCATTTGTAGCTGAATTTGATACCAGTAAGCTTAGCTCTGGATTCAGTGATAAAAAATCTGAAAAGGAGGAAGCATTAGAGGTTGAGTTGGAGAACCTCAGAGTGAAGCTGAAGGAAGCTCAGCTGGAGAAAGCTGAAATAACTTCAAAGTATGAAAAGCTTTCTGCCATTTGCCGATCTCAGAGACAAGAGATCCAGGATCTCAAGCAAACCCTTGCAGCAAGAACTCCATCGCCAAAGAAAGAGAATATGAGTGCCTCTCCCACAGTTCCATCATCTGCGGCTTTGAGGGAAAAGGTCAGTGGGACGATATGGGATCTCCAGCAAAACAAAGCTGAAATGAAAACTCCCAGTTCAGAACCGAAGTCATGGCAAGCTTTTCCAGAGGAACCCCAGCAAAAAAAGTCTGCTTCTGCGGAGAGTAATAGATTCAAATCTGTTAGGACTAGAAAAATTAATCAAAGCGAGCAACCAGTTCAACCCCATTCAGATTTTGATACATGGGGTTTCGGAACAGATAGTTTCACTGCTGGATCTGCTGCTGCTGCTGCTGGCAGCTCACAGATGCCTAGACCATCAAACACTGAAGGGAGTAATACTCAAGCTTTTGGTAATGCCAGGACACATGAGAGCAAGTCAACTTCCCAACCTTCTGGGTGGGCTGGTTTCTAA 2106 0.4359 MWRFKPFMQKEPAGLEGRSIDVGNLKVNVLKAIAEGGFSCVYLVRDAVHMSKQYALKHMICNDEESLELVKKEISVMKSLKGHPNVVTLYAHAVLDMGRTKEAFLVMEFCEKSLANVLESRGSGYFDEKQVLQIFRDVCNAVFAMHCQSPPIAHRDLKAENLLLGPDGLWKLCDFGSTSTNHKRFEKAEEMGIEEDNIRKHTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSIMDLIRDMLQARPDDRPDITQVWFCVNEQFPIDLQKSLPDRPPELPSSNNHEGSAKPATQSTPMPRRSPPPPPSSGEIKSSSQSSHSSIGGGSGGQLGAFWSTMHANDSSASEVKSKPIFDEEPSNHHASAKHDRIRPDSNQLPKNVGGRKVDIGQLQNVKNSEHGKSYKPDTGSSKDFEIKFYQDTHLGGERRGSSSKENAASFQDKAFDSFVAEFDTSKLSSGFSDKKSEKEEALEVELENLRVKLKEAQLEKAEITSKYEKLSAICRSQRQEIQDLKQTLAARTPSPKKENMSASPTVPSSAALREKVSGTIWDLQQNKAEMKTPSSEPKSWQAFPEEPQQKKSASAESNRFKSVRTRKINQSEQPVQPHSDFDTWGFGTDSFTAGSAAAAAGSSQMPRPSNTEGSNTQAFGNARTHESKSTSQPSGWAGF 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2124 701 Gene3D Transferase(Phosphotransferase) domain 1 11 305 - -
Acco08g2124 701 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2124 701 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2124 701 MobiDBLite consensus disorder prediction 432 447 - -
Acco08g2124 701 MobiDBLite consensus disorder prediction 367 381 - -
Acco08g2124 701 MobiDBLite consensus disorder prediction 382 407 - -
Acco08g2124 701 CDD STKc_GAK_like 26 296 - -
Acco08g2124 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Acco08g2124 701 MobiDBLite consensus disorder prediction 629 701 - -
Acco08g2124 701 MobiDBLite consensus disorder prediction 302 447 - -
Acco08g2124 701 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Acco08g2124 701 MobiDBLite consensus disorder prediction 309 329 - -
Acco08g2124 701 SUPERFAMILY Protein kinase-like (PK-like) 28 341 IPR011009 -
Acco08g2124 701 MobiDBLite consensus disorder prediction 581 621 - -
Acco08g2124 701 MobiDBLite consensus disorder prediction 546 701 - -
Acco08g2124 701 MobiDBLite consensus disorder prediction 344 359 - -
Acco08g2124 701 MobiDBLite consensus disorder prediction 546 574 - -
Acco08g2124 701 Coils Coil 494 549 - -
Acco08g2124 701 PANTHER SERINE/THREONINE PROTEIN KINASE 1 684 - -
Acco08g2124 701 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2124 Acco-ChrAcco08 36258874 36262402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2124 65 289 MAP Kinase Kinase Kinase AT5G11850 29.004 1.21e-19 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Acco08g2124 Pkinase 5e-41 CL0016