Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2113 ATGTCTAACCCACTCAAGGGTTTAGAACTGAGCAGTAGAAGGAAGAAGAAAACAATGGCGCCGAAAACTGCCAGGATCACCAGAAATCCTGAACTGATAAGGGGAATCGGAAAGTATTCGAGGTCGGAGATGTATCACAAGAGAGGTTTGTGGGCCATCAAGGCTAAAAACGGCGGCGTTTTCCCTCATCACGATGCCAAACCTAAGCCCGAAGCTCCTGCCGAGAAGCCTCCTAAATTCTATCCTGCCGACGACGTCAAAAAGCCCCTTGTCAATAAGCACAAGCCTAAACCTACTAAACTTAGAGCCAGCATTACTCCGGGGACTGTATTGATACTTCTTGCTGGGAGATTCATGGGAAAGAGAGTAGTGTTTCTGAAGCAGCTTCCTTCTGGATTGCTTCTTGTCACCGGTCCATTCAAGATAAATGGAGTTCCTTTGAGGCGTGTAAGCCAGTCTTACGTGATCGGAACATCCACGAAGATGGATATCTCCGGAGTTAACTTGGAAAAGTACGACGACAAATACTTCACCAAAAAGGCTGAGAAGAAGCAGAAGAAGGGAGAGGGAGAGTTCTTTGAGGCAGAGAAGGAGGAAAAGAATGTGATCCCACAAGAGAAAAAAGATGACCAGAAAGTAGTGGACGCAGCATTGATAAAAGCCATAGAGAGCATTCCTGACTTGAAGGCTTATTTGGGTTCAAGATTTTCGCTCAAGGCAGGCATGAAGCCTCATGAACTGGTCTTCTAA 750 0.4613 MSNPLKGLELSSRRKKKTMAPKTARITRNPELIRGIGKYSRSEMYHKRGLWAIKAKNGGVFPHHDAKPKPEAPAEKPPKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLILLAGRFMGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVSQSYVIGTSTKMDISGVNLEKYDDKYFTKKAEKKQKKGEGEFFEAEKEEKNVIPQEKKDDQKVVDAALIKAIESIPDLKAYLGSRFSLKAGMKPHELVF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2113 249 MobiDBLite consensus disorder prediction 61 92 - -
Acco08g2113 249 FunFam 60S ribosomal protein L6 103 187 - -
Acco08g2113 249 CDD KOW_RPL6 97 249 IPR041997 -
Acco08g2113 249 MobiDBLite consensus disorder prediction 1 27 - -
Acco08g2113 249 Gene3D - 103 187 IPR014722 -
Acco08g2113 249 PANTHER 60S RIBOSOMAL PROTEIN L6 19 249 IPR000915 GO:0003735|GO:0005840|GO:0006412
Acco08g2113 249 MobiDBLite consensus disorder prediction 61 100 - -
Acco08g2113 249 Pfam Ribosomal protein L6, N-terminal domain 21 77 IPR005568 GO:0003735|GO:0005840|GO:0006412
Acco08g2113 249 Pfam Ribosomal protein L6e 142 249 IPR000915 GO:0003735|GO:0005840|GO:0006412
Acco08g2113 249 SUPERFAMILY Translation proteins SH3-like domain 103 193 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2113 Acco-ChrAcco08 36021820 36024276 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2113 22 249 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 81.579 1.72e-122 346