Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2101 ATGGTGGAAAAGACGGCAAAAGGGAGAAAGGAGGAGGTCGTCACCAGAGAGTACACCATCAACCTCCATAAGCGCTTGCACGGATGCACATTCAAAAAGAAGGCTCCAAAGGCCATCAAGGAAATTAGAAAGTTTGCCCAGAAAGCTATGGGAACAACTGATGTGAGAGTGGATGTCAAGCTCAACAAGCACGTCTGGAGTGGTGGAATCCGCAGCGTCCCAAGGAGAATTCGTGTTCGCGTAGCCCGAAAGAGAAATGATGAAGAAGATGCCAAGGAAGAGTTTTACTCATTAGTCACTGTTGTAGACATGCCAAGAGAAGAATTGAAAGGTTTGGGCACCAAGGTGATCGATGAAGAGGATTAA 366 0.4672 MVEKTAKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHVWSGGIRSVPRRIRVRVARKRNDEEDAKEEFYSLVTVVDMPREELKGLGTKVIDEED 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2101 121 Gene3D - 10 121 IPR023621 -
Acco08g2101 121 FunFam 60S ribosomal protein L31 7 120 - -
Acco08g2101 121 CDD Ribosomal_L31e 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Acco08g2101 121 PANTHER 60S RIBOSOMAL PROTEIN L31 2 120 IPR000054 GO:0003735|GO:0005840|GO:0006412
Acco08g2101 121 Pfam Ribosomal protein L31e 12 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
Acco08g2101 121 SMART Ribosomal_L31e_2 11 94 IPR000054 GO:0003735|GO:0005840|GO:0006412
Acco08g2101 121 SUPERFAMILY Ribosomal protein L31e 12 93 IPR023621 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2101 Acco-ChrAcco08 35944195 35945764 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2101 7 121 Cytoplasmic Ribosomal Protein Gene Family AT4G26230 82.609 5.93e-67 196