Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2097 ATGAAAGCGCCAAAGTTTTCAGAAAAGGATGTGAAACGCCGCTTAGAGTTGGAATCTGTTGAAGGTACTTGGGAATCTCCTAATGTCATGCATAAAAGTGATGTCTACTCTTTTGGGGTAGTTTTGTTTGAACTAATCTGCAGAAAGAGATCATTTCGAATTATTAGTGAGCATGAAGTACATAATTTGCAGAGGAAAAAGGAAAAAGCTGAGGGAATTGTTGATCATAGTCTGCTAGGAGAAATAGGAGGAGAGTGTTGGGAATTGTATGTGGAGATTATAGAGAGTTGCTTGAGTGAAGATCCCAATGATAGGCCTCATATGGGGGAAGTTGAAGTCCAACTTGAACGTATATTACAACTTCAAGAGGAAGCTGATACCAACCACTTGGTTTCTTGA 399 0.3935 MKAPKFSEKDVKRRLELESVEGTWESPNVMHKSDVYSFGVVLFELICRKRSFRIISEHEVHNLQRKKEKAEGIVDHSLLGEIGGECWELYVEIIESCLSEDPNDRPHMGEVEVQLERILQLQEEADTNHLVS 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2097 132 ProSiteProfiles Protein kinase domain profile. 1 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco08g2097 132 PANTHER OS07G0166700 PROTEIN 26 122 IPR045272 GO:0004714|GO:0006468
Acco08g2097 132 SUPERFAMILY Protein kinase-like (PK-like) 31 113 IPR011009 -
Acco08g2097 132 Pfam Protein tyrosine and serine/threonine kinase 28 114 IPR001245 GO:0004672|GO:0006468
Acco08g2097 132 Gene3D Transferase(Phosphotransferase) domain 1 13 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2097 Acco-ChrAcco08 35909653 35910051 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2097 32 123 Receptor kinase-like Gene Family AT1G30570 41.837 3.52e-16 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Acco08g2097 PK_Tyr_Ser-Thr 7.9e-09 CL0016