Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2083 ATGCTGCTTACGGCGGTGGCGAAGCAGGCGGTGGAGATGGGTTACGGGAGAGTGGAGTGGACGGTGCTTGATTGGAACGTGAATGCGATCAATTTTTATGAGCATATGGGGGCCAAGGTCTTGCAAGAATGGAGGATTTGCAGGTTAACTGGTCCAACATGCTTGGCAAAGATTATAGGAATATACCAGGTTATAGTAAAGAATCCCAAGGGAGTGAAAGAATCAAATATGGATGTGCTGGTTATGGAGAATCTTCTATTCAGGAGGAACGTGGCACGACTTTATGACCTCAAAGGATCTTCTAGGTCTCGCTATAATTCAGATACTACTGGGACCAACAAAGTCCTGCTGGACCAAAACTTGATTGAAGCAATATCAACTTCTCCCATTTTTATCATTCTAGAGTCAAATGTTTTACCAAAAGCCTCGTCAGAATCTGGAGAATCCATTGTTGCTCTGCCCATTACCAACATGTTCTCTTTGATTTCAGCTCTAAGTTTGGTGACAACAGTGTGTTTGATCTCAAGGAATGTGATGATTAATGCGCTTGAACTTGAGAATTACTATGATTTTCTGGCTCCTTCTCCATCAGGAACGACTGCTGCTTCTGCAGTATCTGCCTCTGCTTCCTCTGTTTCTGTTGGGTTAATAGGTTTCTCTGTTCTGCTCTATGTTGTGGTCACTTTTATTCACTAG 696 0.431 MLLTAVAKQAVEMGYGRVEWTVLDWNVNAINFYEHMGAKVLQEWRICRLTGPTCLAKIIGIYQVIVKNPKGVKESNMDVLVMENLLFRRNVARLYDLKGSSRSRYNSDTTGTNKVLLDQNLIEAISTSPIFIILESNVLPKASSESGESIVALPITNMFSLISALSLVTTVCLISRNVMINALELENYYDFLAPSPSGTTAASAVSASASSVSVGLIGFSVLLYVVVTFIH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2083 231 Gene3D - 86 142 - -
Acco08g2083 231 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 53 124 IPR002498 GO:0016307|GO:0046488
Acco08g2083 231 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1 231 IPR002498 GO:0016307|GO:0046488
Acco08g2083 231 SUPERFAMILY SAICAR synthase-like 48 132 - -
Acco08g2083 231 Gene3D - 1 59 - -
Acco08g2083 231 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 60 IPR000182 GO:0016747
Acco08g2083 231 SMART PIPK_2 1 160 IPR002498 GO:0016307|GO:0046488
Acco08g2083 231 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 51 132 - -
Acco08g2083 231 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 2 52 IPR016181 -
Acco08g2083 231 Pfam Acetyltransferase (GNAT) family 1 37 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2083 Acco-ChrAcco08 35828140 35831033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2083 52 132 EF-hand Containing Proteins AT3G14270 74.074 6.97e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Acco08g2083 PIP5K 1e-08 CL0016