Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2067 ATGAGAGAGAAACAAAGCCCAAAACCGAAACCAAAGCACGACAAAACAAAACTGCAATCCAGGACTTCTCTGATTCCTTGCTCTGTACCTTCGATTCTCCGATTCTCGTCATGCTTTGTTCGGAATGTGAAGAAGGTAAGGCATGTGATTGTTAAAGCTGCCTCGCACTGCACTCTGTTGAATTCGAAAGAGCTTGACCGTACAATGGAGGTGCATTACATAGATACGGGCTTTCCTTATACTGTTACAGAAAGCTTCATGAACTTCTTTGAAGGCATCACGTATGCACCAGCGAATTGTCTCCACACCGGATCTGTGCCTGATCAGGAAAGTGCCAACTGGATGATGAATATGAGCCCATATAAATATTACATGTCTGGCCCCATGTGTCCATCTTATTTTGGTTATCCTGAATATATCCTTCCGTTACCAAGGATGGAGGTCAACAGGGGACAGTGGGAAAGCCCTTCACCAATGACCATTGAGGAGCCTGCAACAACAGACTCTTTGTCCAGAAGAGATGGCGTTGCTGGCATGCAGACCATTCCTGAAGAATGCAGCCCTAATCATCAAGATTCCCCTGTTACTCAGGATGCATGGCAGCAAGACAGCATCGATCCCGATAATATGACTTATGAGGAATTACTGGACTTGGGTGAGGCAGTTGGAACTCAAAGCAGAGGCCTTTCTAAAGAACTTATTGATTCGCTTCCAGTCTCAAAGTACAATTTTAAAAGCATGTTTAAAAGAAAAAAATATGGGAAAAGGTGTGTAATCTGTCAGATGACATACAAAAGAGGTGACCAACAAATGAAATTGCCATGCACGCATGTTTACCATAGTGAATGCATCTCCAAATGGCTTAGCATTAACAAGAAGTGCCCAGTTTGCAACACTGAGGTGTTTGGCGAGGATTCAAGGAATTAG 927 0.4358 MREKQSPKPKPKHDKTKLQSRTSLIPCSVPSILRFSSCFVRNVKKVRHVIVKAASHCTLLNSKELDRTMEVHYIDTGFPYTVTESFMNFFEGITYAPANCLHTGSVPDQESANWMMNMSPYKYYMSGPMCPSYFGYPEYILPLPRMEVNRGQWESPSPMTIEEPATTDSLSRRDGVAGMQTIPEECSPNHQDSPVTQDAWQQDSIDPDNMTYEELLDLGEAVGTQSRGLSKELIDSLPVSKYNFKSMFKRKKYGKRCVICQMTYKRGDQQMKLPCTHVYHSECISKWLSINKKCPVCNTEVFGEDSRN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2067 308 SMART ring_2 257 297 IPR001841 -
Acco08g2067 308 MobiDBLite consensus disorder prediction 1 20 - -
Acco08g2067 308 Pfam Ring finger domain 256 298 IPR001841 -
Acco08g2067 308 SUPERFAMILY RING/U-box 256 302 - -
Acco08g2067 308 MobiDBLite consensus disorder prediction 153 172 - -
Acco08g2067 308 ProSiteProfiles Zinc finger RING-type profile. 257 298 IPR001841 -
Acco08g2067 308 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 67 304 IPR033276 GO:0004842|GO:0016567|GO:0046621
Acco08g2067 308 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 219 302 IPR013083 -
Acco08g2067 308 MobiDBLite consensus disorder prediction 1 19 - -
Acco08g2067 308 FunFam E3 ubiquitin ligase BIG BROTHER 219 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2067 Acco-ChrAcco08 35504064 35509560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2067 70 306 C3H Transcription Factor Family AT3G63530 50.420 8.43e-81 243