Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2063 ATGAACATGAACAATAAGAGCAAGATGAGGAAAGGGATGTGGTCGCCGGAGGAAGATGAGAAACTGATGAGGTACATGCTGACGAATGGACAAGGTTGTTGGAGTGACATTGCCAGAAACGCCGGCCTTCTTCGCTGCGGCAAAAGTTGTCGCCTTCGTTGGATCAATTACCTCAGACCTGACCTCAAACGTGGTGCTTTTTCCCCTCATGAGGAACACCTCATCATTCACCTTCACTCTCTTCTTGGCAACAGATGGTCTCAAATTGCTGCACGTCTTCCTGGGAGAACAGATAATGAGATTAAGAATTTCTGGAACTCAGCATTGAAGAAAAGGTTCAAAAATAACAACACTTCATCATCTTCATCACCAAACAACTCATCATCTTCTACATCCTCATCATCAGAACCTAAAAATCATGTCTCGGTCAATGGAAATTCAAGCATGATCGACCCGTTAATGCCCACTTCATCATCGTCCTCCTTGTCGTCGTCCATGCAAGTCCCAATCATTTTCGGAGATCAATTAGGTTCCAGTGATACCTTTTTCACATTAAATGATCATCATCATCATAATTTTGAAGGAGCTGGTAATTTTCCTTTATTACCTGCAACAGATCAAGTTGGGAGTATAGAAGAAGGGCTTTATAATAATAATGGAGATTGTGGGACAATATTACTAGAGCCAGCTGGTTGTAACAACATGGAAAGTGGTGGTAGAGGCAATAATAATATTAGTGTCCCAAATTTTGATGATGATCTTATTAGTGTGAAAAGCCAGTACAACAACAACTTTAATAATAGTTGCTTCAATTACACTAATGATCATCATCACCATCAAATAATTCAGAGCTCTATAAGTAAAGTAGATGACTCAGAGGGCATGTTTGGGTTTGGAAATAGCAAGATCATCAATAATAATATTATTGAGCACTTTGAAGAAAACCTAATGGTGGGAGATCAATGGGATTTAGAAGGTCTGATGCAAGATATGTCTTCTTTTCCCTTCCATGATTTTTCCAAGATAGTCGAATAA 1035 0.3942 MNMNNKSKMRKGMWSPEEDEKLMRYMLTNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPHEEHLIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSALKKRFKNNNTSSSSSPNNSSSSTSSSSEPKNHVSVNGNSSMIDPLMPTSSSSSLSSSMQVPIIFGDQLGSSDTFFTLNDHHHHNFEGAGNFPLLPATDQVGSIEEGLYNNNGDCGTILLEPAGCNNMESGGRGNNNISVPNFDDDLISVKSQYNNNFNNSCFNYTNDHHHHQIIQSSISKVDDSEGMFGFGNSKIINNNIIEHFEENLMVGDQWDLEGLMQDMSSFPFHDFSKIVE 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2063 344 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Acco08g2063 344 Gene3D - 65 140 - -
Acco08g2063 344 CDD SANT 14 58 IPR001005 -
Acco08g2063 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 58 IPR017930 -
Acco08g2063 344 Pfam Myb-like DNA-binding domain 64 108 IPR001005 -
Acco08g2063 344 Pfam Myb-like DNA-binding domain 11 58 IPR001005 -
Acco08g2063 344 SMART sant 63 111 IPR001005 -
Acco08g2063 344 SMART sant 10 60 IPR001005 -
Acco08g2063 344 FunFam MYB transcription factor 8 64 - -
Acco08g2063 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Acco08g2063 344 CDD SANT 66 106 IPR001005 -
Acco08g2063 344 PANTHER MYB DOMAIN PROTEIN 55 4 287 - -
Acco08g2063 344 MobiDBLite consensus disorder prediction 115 161 - -
Acco08g2063 344 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Acco08g2063 344 Gene3D - 9 64 - -
Acco08g2063 344 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2063 Acco-ChrAcco08 35387687 35389780 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2063 4 339 MYB Transcription Factor Family AT3G08500 46.154 7.92e-78 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco08g2063 Myb_DNA-binding 1.5e-12 CL0123