Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2052 ATGGAGTCAGAAGGAGAAGCAGGGGGAAAGCCTATGACAGTGTTGGGTGCCCAAGTCTGCCAGATCTGTGGTGATAATGTTGGGAAGACTGCGGATGGTGAGCCATTCATTGCATGCGATGTTTGTGCTTTTCCTGTATGCAGGCCATGCTATGAGTATGAAAGGAAGGATGGGAATCAGTCTTGTCCTCAGTGTAAAACCCGATACAAGAGGCACAAAGGAAGCCCTGCAGTTGTTGGAGATAGGGAAGAGGATCTTGCTGCTGCTGATGGTGCTAGTGACTATGAGTCAGAAAACCCAAGCCAAAAGAAGATTTCAGAGCGCATGTTGGGCTGGCAAATGAAATATGGGCAGTCAGAGGAGGTCGGTGCTCCAAAGTATGATAAGGAGGGTCCTCACAACCACATTCCTTTGCTAACCAGTGGACAAGAGGTCTCTGGAGAATTATCAGCTGCCTCACCTGAGAGGCTTTCAATGGCATCACCTGGGATTGGTGGTGGAAAGCGGGTTCATAATCTGACATATTCATCAGATCTTAATCAATCACCGAATATTAGGGGCATGGATGGAGGAATGGGTAATGTGGCATGGAAGGAAAGAGTTGATGGCTGGAAGATGAAGCAGGAGAAGAATTCCGTTCCAATGAGCACTGGCCATGCAATGAGCACTGGCCCAGCTACTTCTGAAAGAGGAGCTGGTGATATTGATGCCAGTACTGATGTGCTTATCGATGATTCCTTGTTGAATGATGAAGCTCGACAACCGCTTTCAAGGAAGGTTTCTATTCCATCATCTAAGATTAATCCATACCGTATGGTCATTGTTCTACGGTTGATTATCCTTTGTATTTTCTTGCATTACCGAATAACAAATCCCGTGCCCAATGCATATGCATTGTGGTTGATATCAGTCATTTGCGAGATATGGTTTGCCATATCTTGGATTTTGGATCAGTTCCCCAAGTGGCTCCCTGTGAACCGTGAAACATATCTTGACAGGCTCTCACTCAGGTATGAACCGGAAGGAGAACCATCACAACTAGCAGCTGTTGACATTTTTGTCAGTACTGTGGATCCTTTAAAGGAGCCACCACTTGTGACTGCCAATACCGTGCTATCTATTCTTGCAGTTGATTACCCAGTTGATAAGGTCTCCTGCTATGTATCTGATGATGGTGCTGCTATGTTGACATTTGAAGCTCTGGCTGAGACATCTGAATTTGCTAGGAAATGGGTTCCTTTTTGTAAGAAGTACAATATTGAACCTCGGGCTCCAGAGTGGTACTTTGCTCTGAAGGTTGACTACTTGAAGGATAAGGTTCATCCATCATTTGTCAAAGAACGTAGAGCCATGAAAAGAGAATATGAAGAATTCAAAGTTCGCATTAACGGATTTGTTTCAAAGGCACAGAAAGTTCCTGAGGAAGGATGGGTAATGCAAGATGGCACTCCATGGCCTGGAAACAATACTAGAGACCATCCAGGAATGATCCAGGTGTTTTTGGGTCAAAGTGGAGGACTTGACTCTGATGGTAATGAGTTGCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGTTTCCAACATCACAAGAAGGCTGGTGCCATGAATGCTCTGGTTCGTGTATCAGCTGTTCTTACTAATGGTCCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCCATGTGTTTCATGATGGATCCCAATCTTGGGAAAAATGTTTGCTATGTCCAGTTTCCTCAAAGGTTTGATGGTATTGATAAGAACGATCGATATGCCAATCGTAACACTGTGTTCTTTGATATAAACTTGAGAGGTTTGGATGGCATTCAAGGACCTGTGTATGTCGGTACTGGATGTGTCTTCAACAGAACGGCCTTATATGGTTATGAACCTCCTGTTAAGCCCAAGCATAAGAAACTTGGGTTGCTGTCTTCTCTCTGTGGCGGAAACCGAAAGAAGAAGTCTAAATCTAGCAAGAAAGGCTCAGACAAGAAAAAATCTGGCAAAAATGTTGACCCAACTGTGCCCATCTTCAACCTAGAAGATATAGAAGAAGGAGTTGAAGGTGCAGGATTTGATGATGAGAAGACACTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAATCTGCTGTTTTTGTTGCGTCTACGTTGATGGAAAACGGTGGTGTTCCTCAGTCTGCTACCCCCGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGACAAGTCAGAATGGGGATCTGAGATTGGATGGATCTATGGTTCCGTGACAGAAGATATTCTCACTGGATTTAAGATGCATGCTCGTGGGTGGAGATCTGTATACTGCATGCCCAAGCTTCCAGCATTTAAAGGTTCAGCTCCTATCAATCTTTCAGATCGTCTGAACCAAGTGCTTCGATGGGCTCTGGGTTCTGTGGAAATTCTTCTGAGTAGACACTGTCCCATATGGTATGGTTACAGTGGAAGGCTCAAATGGCTTGAGAGGTTAAGTTATGTCAACACCACTATCTACCCAATCACTTCCATTCCCCTCCTCATGTACTGTACCTTGCCAGCCGTCTGTCTCCTCACAAATAAGTTCATTATCCCACAGATTAGCAACATTGCAAGTATATGGTTTATCTCCCTCTTTCTTTCCATTTTCGCAACGGGTATCTTGGAGATGAGGTGGAGTGGTGTTGGAATCGACGAGTGGTGGAGAAATGAGCAGTTTTGGGTCATCGGTGGTGTCTCCGCCCATCTCTTCGCCGTGTTCCAAGGTTTACTCAAAGTCCTCGCCGGAATTGACACAAACTTCACTGTCACCTCCAAAGCAACAGATGAAGATGGCGACTTTGCTGAACTGTACATGTTCAAATGGACCACCCTCCTCATCCCACCCACCACCCTCATCATCATTAACCTCGTCGGAGTCGTCGCCGGCATCTCCTACGCCATTAACAGTGGCTACCAGTCGTGGGGTCCACTCTTTGGCAAGCTCTTCTTCGCTTTCTGGGTCATCATCCATCTCTACCCTTTCCTCAAAGGTCTTATGGGAAGGCAGAACCGCACGCCCACCATTGTTGTGGTCTGGTCCATTCTTCTTGCCTCCATCTTCTCTTTGTTATGGGTCCGGATCGACCCGTTCACGACCCGAGTCACCGGTCCAGATTCCGAGCAATGTGGAATCAACTGCTAG 3237 0.4557 MESEGEAGGKPMTVLGAQVCQICGDNVGKTADGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAVVGDREEDLAAADGASDYESENPSQKKISERMLGWQMKYGQSEEVGAPKYDKEGPHNHIPLLTSGQEVSGELSAASPERLSMASPGIGGGKRVHNLTYSSDLNQSPNIRGMDGGMGNVAWKERVDGWKMKQEKNSVPMSTGHAMSTGPATSERGAGDIDASTDVLIDDSLLNDEARQPLSRKVSIPSSKINPYRMVIVLRLIILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLSLRYEPEGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFCKKYNIEPRAPEWYFALKVDYLKDKVHPSFVKERRAMKREYEEFKVRINGFVSKAQKVPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPVKPKHKKLGLLSSLCGGNRKKKSKSSKKGSDKKKSGKNVDPTVPIFNLEDIEEGVEGAGFDDEKTLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGSEIGWIYGSVTEDILTGFKMHARGWRSVYCMPKLPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYSGRLKWLERLSYVNTTIYPITSIPLLMYCTLPAVCLLTNKFIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKATDEDGDFAELYMFKWTTLLIPPTTLIIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDSEQCGINC 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2052 1078 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 95 IPR013083 -
Acco08g2052 1078 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 501 641 IPR029044 -
Acco08g2052 1078 MobiDBLite consensus disorder prediction 73 104 - -
Acco08g2052 1078 MobiDBLite consensus disorder prediction 210 224 - -
Acco08g2052 1078 FunFam Cellulose synthase 467 641 - -
Acco08g2052 1078 SUPERFAMILY Nucleotide-diphospho-sugar transferases 364 889 IPR029044 -
Acco08g2052 1078 SUPERFAMILY RING/U-box 5 86 - -
Acco08g2052 1078 MobiDBLite consensus disorder prediction 655 684 - -
Acco08g2052 1078 CDD mRING-HC-C4C4_CesA 18 68 - -
Acco08g2052 1078 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Acco08g2052 1078 Pfam Cellulose synthase 350 1071 IPR005150 GO:0016020|GO:0016760|GO:0030244
Acco08g2052 1078 MobiDBLite consensus disorder prediction 210 233 - -
Acco08g2052 1078 MobiDBLite consensus disorder prediction 74 89 - -
Acco08g2052 1078 FunFam Cellulose synthase 3 95 - -
Acco08g2052 1078 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 253 1045 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2052 Acco-ChrAcco08 35058691 35065561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2052 1 1078 Glycosyltransferase AT5G05170 85.264 0.0 1902