Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2034 ATGGAGGAGGTTCAGGAGCCTCAAACTCAACCACTGGGTGGAGAAGATCAAGATGAAATAACTACTGAAAGTTCTGCATTTGTTAAAGGGGAACCTCCACAAGAAGTGAGTAATCCTCCTAAGGTTGACTCAGAGATTGAAGTCCTCCACGAAAATGTTACAAAACAAATAATTAAGGAAGGTCATGGTCAGAAGCCTACCAAATATTCAACATGTTTTTTTCATTACAGGGCATGGACCGAAAACACACAGCACAAGTTTGAAGACACATGGGATGAGCAACGGCCCATTGAAATGATATTAGGAAAAGAGAAGAAAGAAATGACTGGCTTGGCTATTGGTGTGGGCAGCATGAAAGCTGGAGAGCGTGCCTTACTTCGTGTGGGTTGGGAATTAGGATATGGAAAGGAAGGCAACTTCTCTTTTCCAAATGTTCCACCTATGGCAGATTTAGTTTATGAAGTTGAGCTCATAGGCTTTGATGAAACAAAAGAAGGAAAACCTCGCAGTGATATGACTGTTGAGGAAAGGATCGGTGCAGCAGACCGTAGAAAGATGGACGGAAATGCTTTCTTTAAAGAGGAGAAATTGGAGGAGGCCATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTCCAGTTGTCTGGGAAGTATAGTGATATGGCTTTGGCTGTAAAGAATCCTTGCCACCTTAACATGGCTGCATGTTTGATTAAGCTGAACCGTTATGATGAAGCCATAGGACAATGTAGCCTTGTGTTGGGTGAGGATGAAAACAATGTGAAGGCGTTATTTAGACGAGGCAAGGCTAGGGCAGCACTAGGCCAAACAGATGCTGCCAGGGAGGATTTTCTGAAAGCAAAGAAGTATGCCCCAGAAGATAAAGCAATAACAAAAGAATTGCGATTACTTGCCGAACAGGACAAGGCTCTTTATCAAAAGCAAAAAGAGATATATAAAGGAATGTTTGGACCTAGGCCTGAACCAAAACCCCAGCAAAGGAATTTTCTGATTCTTATTTGGCAGTGGCTGGTGGCGGTATTTCATCGCTCATTATGCTCTTCAAGCGTGAAAGGCAAAAATCTGACTAATCAAAAGCTATTGAATAAACTGAAGAATGGTGAATCCAATAGCTCGAGTTGA 1158 0.4223 MEEVQEPQTQPLGGEDQDEITTESSAFVKGEPPQEVSNPPKVDSEIEVLHENVTKQIIKEGHGQKPTKYSTCFFHYRAWTENTQHKFEDTWDEQRPIEMILGKEKKEMTGLAIGVGSMKAGERALLRVGWELGYGKEGNFSFPNVPPMADLVYEVELIGFDETKEGKPRSDMTVEERIGAADRRKMDGNAFFKEEKLEEAMQQYEMAIAYMGDDFMFQLSGKYSDMALAVKNPCHLNMAACLIKLNRYDEAIGQCSLVLGEDENNVKALFRRGKARAALGQTDAAREDFLKAKKYAPEDKAITKELRLLAEQDKALYQKQKEIYKGMFGPRPEPKPQQRNFLILIWQWLVAVFHRSLCSSSVKGKNLTNQKLLNKLKNGESNSSS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2034 385 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 65 158 IPR001179 GO:0003755
Acco08g2034 385 MobiDBLite consensus disorder prediction 1 42 - -
Acco08g2034 385 FunFam Peptidylprolyl isomerase 166 294 - -
Acco08g2034 385 Gene3D - 37 162 IPR046357 GO:0003755
Acco08g2034 385 Pfam Tetratricopeptide repeat 267 299 IPR019734 GO:0005515
Acco08g2034 385 SMART tpr_5 232 265 IPR019734 GO:0005515
Acco08g2034 385 SMART tpr_5 266 299 IPR019734 GO:0005515
Acco08g2034 385 SMART tpr_5 181 214 IPR019734 GO:0005515
Acco08g2034 385 SUPERFAMILY FKBP-like 39 160 - -
Acco08g2034 385 SUPERFAMILY TPR-like 173 327 IPR011990 GO:0005515
Acco08g2034 385 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 69 161 IPR001179 GO:0003755
Acco08g2034 385 MobiDBLite consensus disorder prediction 10 28 - -
Acco08g2034 385 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 96 338 IPR039663 -
Acco08g2034 385 ProSiteProfiles TPR repeat profile. 266 299 IPR019734 GO:0005515
Acco08g2034 385 Gene3D Tetratricopeptide repeat domain 163 294 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2034 29 329 Calmodulin-binding Proteins AT3G25230 32.219 5.59e-31 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g2034 08 34813711 34817740 Acco08g2034 08 34813711 34817740 ECH