Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2032 ATGAAGAGGTTGAGGTCTAGTGAGGATCTCCATTCGTACGGAGACAAGAATGGGTGCAAGGATTCGAATCTGAACCGATCCTCGTCTTCTTCACACCGAACCTTTTACTACAAACCTGATAATGTGCGGAAGGGATTGCTTTCCTCAGCGTCTTCGGCGTCTCGGTATGACAGGGATCGAATGGTGGATGAGGATCGGGAAGGCTCCCGCTTGGTTCGGAAGCGATCAGACCATGATTTTGATAGTTTTGATCGCAGAAAGGGGTTTGATCGTTACAGGGACACTGGAGATAATAGAGGATACGGAGCTGGAGGGGATAGGGGTTTGATGCAGAGGTCGGAGAGTTTTTGTGGGTCTAGGAGGGATTTTCCGAAGGGCTTTCGGTCTGAGAGGGACCGGTCTCGGCGGGAAGGTAGTGTGTCTTCGTGGCGGAGATTTGGTGGTGGGTTTAAGGATTTTGATGATAGTGGCAGAGGTAGCAGGGTTGGACTGGAAGATAGAGTAGTGCGGTCTCCGAAGACTTTGAGGGATGTAAAATCACCGACATGGTCAAAAGATTCAGAGAGTGAGCATTCTAAGATGAGTGAGCAGTCTAAGGTGAGGTCTTCTTCAAGAGGGTCAAGAGATGCAAAGTCGAAGTCAAAGTCTCCATCTTGGTCCAAGGATTCAGAGAGTGAACAATCAAAGAGTGAGCAATCTAAGAGTGTTGAGGTGAAGAAAACTGAGGAATTGCAGGTTGAGAGCCATAGTAGTAGTGAAATGGAAGAAGGAGAACTTGAGCCAGAACCCATGCCTGAAACAGAACCGGAAAAGGCTTCTGATGCTGCACATAAGAATGAAGACCAGACCTCTATTCCTTTGGACACTGATGAGAAGGAAATCCAGACTGAAAGCCAGCTCAATGATACAGATACTACAACGCATGAAATAATGGGAGAGTTGAATAAAGAAGAGGCAAAACCTGAAGAGGTTGCTAATTCAGCTGAACAGATTGTGGAGAAAGATAAGAAGCTGCCGGATGTTCAGAATGATCCAACTGATGAAGTGCATGATACCAAAAATGAAATTGAAACTTCTGTTCATAATGATAACAAGGCGGAAGAGAGTTCAAAAGTGGAAACCGCATGTAAGGGGGAAACAAAGGAAGGTGCGGAGCATGAGAAGCCATCGCTTCATGAAGAGGACCATAAGCAGGACAAGGGTGTAGATCTTGAAACCAGGGCAGAGCGACACAAGGAAGTTTCGACAGAAAATGAAGTGCTTAAAACAGATGTGGAAATGACGATAGAGACTGTGACCAGCATCGTGAAGGATAAAGGCAAAAGTGTCTCTGCTACAGCTTCTGATGTCGTTCATCCTTCTGAAGATGGTTTGTGGAATACAACAGGGCACAGAGATCTCACAGCATGCGCAGGTGATGCCATGGAAGGTCCAAGCACAAGGGGCTTTGAGTTGTTTTCCAGATCTCCTGTTAGGAAAGCAGAGAAAACTGACCAATCAAGTCTCAGCAAACATAAAGATGGAAGTCTTTCAATGGAGGAGCTTGATCTTTCTCTTAGCTTGCCTAATGTTTTGTTACCTATTGGTGCTCATGAGACTACACCAGCCCCTGGATCCCCCAGTCAAGCTCAAAGTGTCCAGTCTTTAAGTACATGCCGGACCAACTCAGAAGGATTTACTGCGTCAATGTCTTTCTCAGGTTCTCAATCTTTTTATCACAATCCAAGCTGTTCTCTCACACAAAATTCAATCGATTATGAACAATCTGTTCATAGTCGCCCATTATTTCAGGGAATAGATCAAGTTTCTCATGTAGGCTGGCAAGGTATCTCTCAGACTGATCCCAAACAGAAAGAAATTTCTTACTGTCAAGGAACTTTGATTAATGGCAGTGGCAGCTTTACTCAGTCTCAAGCAACATGGGCCGTTTCAGACAGTCAAGTTGTGAAAGGTCAGCCTTCTAGAGTTCTAGAAGGTAGCTCAAAAATGGCCAGTAGCCTTGACAGGCAATTGAGTTTTCATAAGCAGCTGTCAGGACAGTCTAGGCGCCATGGTGATGTTAGATCTCCTTCTCAGAGTGTTGGTTCTCATGACATTGGACCAAGTTATAGTTTTGACAAGAAGAAAGAAATGAGAGACAGGAGTAATGGTAGTTTATACAGGACTTCAAGCCAGAAGGAACAAGAGCAATTTCAGATGGGTGGAATTGAGTTTGTTGAGACAATCATTGCAAAAATAGTTTCTGAACCAGTGCCTGCTATGGCTAAAAAGTTTCATGAAATGAATGGACAGACTTTATCATGTTTGAAAGAGAGCATTCGTGAGATTATGCTTAGTGCAGATAAGCATGGGCAAATACTTGCTTTTCAGAAAGTTCTGCAGAACCGGTCTGATATAACCCTGGAGGTTTTGCTAAAGGCCCACCGAGTTCAATTGGAAATTTTGGTTGCTTTGAAAATGGGTATAGCTAATTTTATTCAGTTAGACAACAGCTTTCCGTCTACTGATTTAGCTGAGATTTTTCTGAACTTAAGGTGTAGGAATGATTTATGCCGAAGTCAGTTGCCTGTGGATGAGTGTGATTGCAAAGTTTGTGCACAGAAAAATGGCTTTTGCAGTGCATGTATGTGTCTTGTGTGTTCTAAGTTTGACAACGCATCAAATACTTGTGGTTGGGTTGGATGCGATGTTTGCCTTCATTGGTGCCATACGGAATGTGGATTACGTGAATCATATATTAGAAATGGACCTAGTGCTACTGGGGTACAAGGGGTACCTGAGATGCAATTTCATTGTATTGCCTGTGATCATCCTTCAGAGTTGTTTGGTTTTGTCAAGGAAGTGTTTCTAAATTTTGCAAAAGATTGGTCAGTTGAAGCTCTTTGCAAGGAGCTTGAATATGTGAAGAGAATATTTTCTGCCAGCAAAGACATGAGAGGGAGACAGCTGCATGGGGTGGCTGATCAAATGCTACTAAGGTTGGCAAATAAATCTAACCTTCAAGAGATTTATAGCCAAATCATGTCTTTCCTAAATGATGGAGATTCTTCCAAATTAGCCTTGACACGGAACTTTTCTGGGAAGGAGCAAATTAAAGAAAAAACTATAGTTGCTGAGCCCAGTCAGCAGGAGGCTGCCTGGATGAAGTCAATCTATTCTGAAAAGATGCCTCTGTTAGAACGGCCAGCAAACATCCTTTCCAGCTATGACCGTAATGATAAACGGGCTCCACCACAAGAGTTGCAGATGAATGTCCAAAAGGACTATTGTTTTGATGAATTGGAGAGCATAATAAAAATTAAACTGGCAGAGGCTAAAATGTTTCAAACACGTGCGGATGAAGCCAGAAGAGAAGCTGAAGGCCTGAAACGCATTGCCCTCACAAAGAATGAGAAGATTGAAGAAGAGTATGCCAGCCGACTCTCAAAATTGCGACTGGCAGAGACCGAGGAAATGCGTAAACAAAAAATTGAAGAGCACCAGGCATTGGAAAGAGCGCATATGGAGTACTTTAACATGAAAATGAGGATGGAAGCAGACATTAAGGATCTGCTATTGAAAATGGAAGCAACCAAAAGGAGTCTTGCTATGTGA 3594 0.4338 MKRLRSSEDLHSYGDKNGCKDSNLNRSSSSSHRTFYYKPDNVRKGLLSSASSASRYDRDRMVDEDREGSRLVRKRSDHDFDSFDRRKGFDRYRDTGDNRGYGAGGDRGLMQRSESFCGSRRDFPKGFRSERDRSRREGSVSSWRRFGGGFKDFDDSGRGSRVGLEDRVVRSPKTLRDVKSPTWSKDSESEHSKMSEQSKVRSSSRGSRDAKSKSKSPSWSKDSESEQSKSEQSKSVEVKKTEELQVESHSSSEMEEGELEPEPMPETEPEKASDAAHKNEDQTSIPLDTDEKEIQTESQLNDTDTTTHEIMGELNKEEAKPEEVANSAEQIVEKDKKLPDVQNDPTDEVHDTKNEIETSVHNDNKAEESSKVETACKGETKEGAEHEKPSLHEEDHKQDKGVDLETRAERHKEVSTENEVLKTDVEMTIETVTSIVKDKGKSVSATASDVVHPSEDGLWNTTGHRDLTACAGDAMEGPSTRGFELFSRSPVRKAEKTDQSSLSKHKDGSLSMEELDLSLSLPNVLLPIGAHETTPAPGSPSQAQSVQSLSTCRTNSEGFTASMSFSGSQSFYHNPSCSLTQNSIDYEQSVHSRPLFQGIDQVSHVGWQGISQTDPKQKEISYCQGTLINGSGSFTQSQATWAVSDSQVVKGQPSRVLEGSSKMASSLDRQLSFHKQLSGQSRRHGDVRSPSQSVGSHDIGPSYSFDKKKEMRDRSNGSLYRTSSQKEQEQFQMGGIEFVETIIAKIVSEPVPAMAKKFHEMNGQTLSCLKESIREIMLSADKHGQILAFQKVLQNRSDITLEVLLKAHRVQLEILVALKMGIANFIQLDNSFPSTDLAEIFLNLRCRNDLCRSQLPVDECDCKVCAQKNGFCSACMCLVCSKFDNASNTCGWVGCDVCLHWCHTECGLRESYIRNGPSATGVQGVPEMQFHCIACDHPSELFGFVKEVFLNFAKDWSVEALCKELEYVKRIFSASKDMRGRQLHGVADQMLLRLANKSNLQEIYSQIMSFLNDGDSSKLALTRNFSGKEQIKEKTIVAEPSQQEAAWMKSIYSEKMPLLERPANILSSYDRNDKRAPPQELQMNVQKDYCFDELESIIKIKLAEAKMFQTRADEARREAEGLKRIALTKNEKIEEEYASRLSKLRLAETEEMRKQKIEEHQALERAHMEYFNMKMRMEADIKDLLLKMEATKRSLAM 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2032 1197 MobiDBLite consensus disorder prediction 530 550 - -
Acco08g2032 1197 Coils Coil 1105 1136 - -
Acco08g2032 1197 Pfam Coiled-coil region of Oberon 1069 1185 IPR032535 -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 488 509 - -
Acco08g2032 1197 Coils Coil 1174 1194 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 702 716 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 118 140 - -
Acco08g2032 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1092 1112 IPR004082 -
Acco08g2032 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 757 779 IPR004082 -
Acco08g2032 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1131 1153 IPR004082 -
Acco08g2032 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 811 826 IPR004082 -
Acco08g2032 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 837 858 IPR004082 -
Acco08g2032 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 883 903 IPR004082 -
Acco08g2032 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 796 811 IPR004082 -
Acco08g2032 1197 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 956 975 IPR004082 -
Acco08g2032 1197 Coils Coil 1146 1166 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 675 699 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 474 509 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 675 726 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 309 419 - -
Acco08g2032 1197 CDD PHD_OBE1_like 876 935 IPR047578 -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 18 36 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 1 16 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 148 256 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 264 298 - -
Acco08g2032 1197 Pfam PHD - plant homeodomain finger protein 846 969 IPR032881 -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 535 550 - -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 1 419 - -
Acco08g2032 1197 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 1195 IPR004082 -
Acco08g2032 1197 MobiDBLite consensus disorder prediction 56 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2032 Acco-ChrAcco08 34789256 34793624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2032 846 1012 PHD Gene Family AT5G57380 25.134 6.19e-11 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g2032 08 34789256 34793624 Acco08g2032 08 34789256 34793624 ECH