Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2017 ATGGCTGAACCCCGTCGTAAGCGCCCCAAAATTGCCAGGGGAGAAGATGATTTTATGCCTGGAAGCATTATCGAGATTGAGCTTCTTAAATTTATGACCTTTGACTACTTAAAATGTAAACCTGGTCCTCGTCTGAATCTTGTTATTGGACCCAATGGTTCTGGGAAGAGTTCACTTGTGTGTGCCCTTGCACTTGGCCTTGGGGGTGAGCCTCAGCTGCTAGGACGAGCAACAAGTATTGGATCATATGTGAAGCGAGGAGAAGAATCAGCTTGCATTAAGATTACATTGAGAGGGGATGGTAAAGATGAGCATATCACTGTTGTTCGGAAAATAAATACGAGTAACAAGTCTGAGTGGTTGTTCAATGGAAGAGTAGTGCCCAAAAAGGATGTGATGGAAGTCATTCAACGGTTTAACATCCAAGTTAATAATTTGACTCAATTTTTACCCCAGGACAGGGTCTGTGAATTTGCTAAATTAACTCCTGTGCAACTTCTGGAAGAGACCGAAAAGGCTACTGGTGATCCCCAACTTCCAATCCTTCACCATACTCTTGTTGAGAAAAGCCGTGCATTGAAGCAAATTGAGCTGACAGTGAAGAAAAATGAAGAAACTTTGAAACAGCTAAAAGACCTTAATGCTGAACTTGAGAAGGATGTTGAACGTGTCCGTCAAAGGGATGAACTACTTAAAAAGGCTGAGTCCATGAAAAAGAAATTGCCGTGGCTTAGATATGATATGAAGAAGGCTGAATACTTGGAAACTAAAGAACGTGAAAATGACGCTAAAAGAAAGATGGAGGAAGCTGCAAAGATGTTAAATGATCTGAAAGAACCCATCGAGAAACAGAAAAAGGGCAAGGCAGCAATGGATGCAGAATGTAAAAAAGTTGCCAACCTTGTAAATGGCAACGCCAAGAAGCGAATGGAACTTCTGGATAAAGAAAACCATCTGGGTGTGGAATTGCAAGGAAAATACAATGAAATGGAAGATTTGAGGAGGCAGGAAGAAACTCGTCGGCAAAGACTTTTAAAGGCTAAGGAGGAACTTGCTGCTGCTGAACATGAACTGGAGAATCTGCCTCATTATGAACCTCCAAAGGAAGAGATTGAAAGACTAAAAGAAGAAATTTTGAACTTGCAAAATTCTGCATCTCAAAAGAGGTTAGAGAAGTCAGAAACAGACAAATATTTATGTCAGAAAAAGTCATCATTGGTACAGTGTATGGACAGGTTGAGGGAGATGGATAGTAAAAATACTAAGTGTCTGCGTGCGTTACGAGAGTCAGGGGCAGATAGGGTAGTGGAAGCTTATAAATGGGTGCAAGATAATAGCCAATTATTCAATAAGGAAGTTTATGGTCCTGTATTGCTGGAGGTTAATGTCTCGAAGCAGACTCATGCTGCCTTCCTGGAGGGTCATGTTCCTTATTACATCTGGAAGTCTTTCATTACTCAAAATTCAGAGGATCGGGACCTTTTGGTAAAAAATCTGAACTCCTTTGATGTTCCAGTATTAAATTATACTGGTGGTGATTGTAGTCAGAGAGAGCCCTTTCAAATTTCTGAAGATATGCGTACTCTTGGTATCTACTCCCGTCTTGATGAAGTTTTTGATGCTCCTACAGCTGTTAAGCAGGTTTTGATTGGACAGTTTGGTCTGGATCATTCATATATTGGAACCAGAGAAACTGATCAGAATGCAGACAGGGTCCAAAAGTTGGGCATTTTTGACTTTTGGACTCCAGATAATCACTATCGGTGGTCTAAATCTAGATATGGGAATCATGTATCTGGAGTTGTTGAACAAGTACAACGCTCAAGACTTCTTTCATACAATATAGACGCTAGAGAAATTGAGAAGCTGAGGGCTCACAGAATGGACCTTGAAGAATCTATAGAAACCTTGGAAGCAACGTCTAGAAGGTTACAAGATGAGGAGAGACGCCTAAGCAATGAAGCAGCTAATCTTCGCAGACAGCGGGATGAAATAAACACTGCTGTGCTCAAAGAGAAGGAAAAGCGCCGGGATATCATGCGCACCATTGAACTGAGGAAAAGGAAATTAGAATCATTGGCGGAGGAGGGTGATGTGGATTTAGTTATTGCTAAGCTGACTGATGAAGCAAGAAATTGTAATATTCAGCGATTCCGCAATGCAATCAAAATTAAGAACCTACTTCTTGAGGCAATTGGTTATAGACGGAGTTATGCTGAGAAACATATGGCTACTGTTGACTTTGATGCTAAGATTAGGGAGTCGGAGGCTGATTTGAAGCAGCACGAGAAGCTTGGTTTACAAGCATCATTACAATTTGAAACCTGCAAGAAGGAGACTGAGAATTGCCGACAGCAGCTTTCAGAATGTCTGAGACGTGCTGAATCAATTGCTCCCATCACTCCAGATCTTGAGAAGGAATTTCTTGAGATGCCCACTACTATTGAGGATTTGGAAGCTGCTATCCAAGATACCACTTCTCAAGCCAATTCTATACTTTTTGTCAATCATAATGTGTTAGAACAATATGAGAATCGTGAACGTCAGATAGGATCTTTAGCCACAAAACTTGAAGAAGATAAGAAGGAAGTAAGTAGGTGTCTAACTGAAGTAGACGCCCTAAAGGGGACATGGCTTCCAACATTGAGGAACCTTGTGGCCCAGATAAATGAAACTTTCAGTCGTAATTTCCAAGAGATGGCTGTTGCAGGAGAAGTTTCACTGGATGAGCGTGACGTGGACTTCGATCAGTTTGGGATACTCATAAAAGTGAAGTTCAGACCAACAGGACAGCTTCAAGTTCTGAGTGCCCACCATCAGTCTGGAGGGGAGCGATCAGTTTCTACTATTCTTTATCTTGTTTCTCTTCAAGATCTTGCCAACTGCCCATTCAGAGTGGTTGATGAAATTAATCAAGGCATGGACCCAATAAATGAAAGAAAAATGTTCCAGCAACTAGTGAGAGCTGCCAGCCAGCCAAATACACCACAATGTTTCTTGCTTACCCCAAAGTTGTTACCCGATCTGGAATACAGTGAAGTGTGCAGTATATTAAATGTAATGAATGGGCCTTGGATTGAGAAAGCCTCAAAAGTTTGGGGTGAAGGTGATCGATGGGGGAAAATTGCAGAGTTGATGGTAGAGAATCAAAACTGA 3156 0.4144 MAEPRRKRPKIARGEDDFMPGSIIEIELLKFMTFDYLKCKPGPRLNLVIGPNGSGKSSLVCALALGLGGEPQLLGRATSIGSYVKRGEESACIKITLRGDGKDEHITVVRKINTSNKSEWLFNGRVVPKKDVMEVIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKATGDPQLPILHHTLVEKSRALKQIELTVKKNEETLKQLKDLNAELEKDVERVRQRDELLKKAESMKKKLPWLRYDMKKAEYLETKERENDAKRKMEEAAKMLNDLKEPIEKQKKGKAAMDAECKKVANLVNGNAKKRMELLDKENHLGVELQGKYNEMEDLRRQEETRRQRLLKAKEELAAAEHELENLPHYEPPKEEIERLKEEILNLQNSASQKRLEKSETDKYLCQKKSSLVQCMDRLREMDSKNTKCLRALRESGADRVVEAYKWVQDNSQLFNKEVYGPVLLEVNVSKQTHAAFLEGHVPYYIWKSFITQNSEDRDLLVKNLNSFDVPVLNYTGGDCSQREPFQISEDMRTLGIYSRLDEVFDAPTAVKQVLIGQFGLDHSYIGTRETDQNADRVQKLGIFDFWTPDNHYRWSKSRYGNHVSGVVEQVQRSRLLSYNIDAREIEKLRAHRMDLEESIETLEATSRRLQDEERRLSNEAANLRRQRDEINTAVLKEKEKRRDIMRTIELRKRKLESLAEEGDVDLVIAKLTDEARNCNIQRFRNAIKIKNLLLEAIGYRRSYAEKHMATVDFDAKIRESEADLKQHEKLGLQASLQFETCKKETENCRQQLSECLRRAESIAPITPDLEKEFLEMPTTIEDLEAAIQDTTSQANSILFVNHNVLEQYENRERQIGSLATKLEEDKKEVSRCLTEVDALKGTWLPTLRNLVAQINETFSRNFQEMAVAGEVSLDERDVDFDQFGILIKVKFRPTGQLQVLSAHHQSGGERSVSTILYLVSLQDLANCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPDLEYSEVCSILNVMNGPWIEKASKVWGEGDRWGKIAELMVENQN 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2017 1051 Gene3D - 22 219 IPR027417 -
Acco08g2017 1051 Coils Coil 371 391 - -
Acco08g2017 1051 Gene3D - 848 1010 IPR027417 -
Acco08g2017 1051 Coils Coil 840 860 - -
Acco08g2017 1051 Coils Coil 193 234 - -
Acco08g2017 1051 Pfam RecF/RecN/SMC N terminal domain 23 991 IPR003395 -
Acco08g2017 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 1002 IPR027417 -
Acco08g2017 1051 Coils Coil 250 277 - -
Acco08g2017 1051 Coils Coil 327 361 - -
Acco08g2017 1051 Coils Coil 620 675 - -
Acco08g2017 1051 FunFam Structural maintenance of chromosomes 5 847 1018 - -
Acco08g2017 1051 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 4 1044 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Acco08g2017 1051 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 994 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2017 Acco-ChrAcco08 34507823 34525735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2017 1 1042 Structural Maintenance of Chromosomes family AT5G15920 64.395 0.0 1383