Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco08g2003 ATGACTTTCTGCAAACAAAGTCATCACCGTCGTTTTCTTCTTCCATCTCTTTTCATTATTCTTTTATCAGTTTCTGATCTGGCCTCTGGTTTCCATGGAAACCAGCAAGCAAAAGCTCAAGACAAGTTTCGGAAGCTGAAGTACTCGAGTGGCCAAAATGTTAATAATAATAACAATAAGATTCCAACAATTGATAAAAGCCTTTTTGAAGCAGAAGAGATTGATATAGAAGCTCATGTTTATGAGCAAGAAGGGTTGAAAGAGAAAGATAGGATTGAGAAGCTTCCAGGTCAGCCTCCGGCCAGGTTTTCTCAGTATGGAGGTTATGTGACTGTGAATGAAGAAGCTGGACGTGCCTTTTATTATTATTTCACTAAAGCTTTTGAGGATCAGCAGAATTTGCCTCTCGTTCTTTGGCTTAATGGAGGGCCTGGATGTTCATCTCTTGGCTACGGAGCCATGCAAGAACTTGGACCCTTCAGAGTCAACAGTGATGGGAAAACCCTTTTCAAAAACAGATATTCATGGAACTATGTTGCAAATGTACTGTTCCTGGAGTCACCAGCTGGAGTGGGATTTTCATATTCAAACAAAACATCAGATTATAACAATAATGGAGACCAAAGCACAGCTTCAGAAAATTATATATTCTTGTTGAATTGGTTAGAAAGGTTTCCTGAATATAAGAACAGAGATTTCTACATTACTGGAGAAAGCTATGCAGGTCACTATGTGCCTCAACTTGCTCAAACTATTCTCTTACACAACATCAAATCCAACAAGACCATCATCAACCTCAAAGGAATCCTGATAGGGAATGCAGCCATAAATGATGAGACAGACGACAAGGGAATGTGTGATTTCCTCGAAAGCCATGCGATAATGTCGGAATCGACGTCTTTAATGATCAACAAGTTCTGTGATTTCTCTCCAAATGCCACAGATCAATCTCAACAGTGCAATCAAGCTTTGGGGCAACTAGACAGAGATTCTTACTATATTGACATCTACAACATCTATGCTCCTCTTTGCCTCAACCCTAATCTCACTGCCACCCCAAAGCCTACCTCTGTTGTTATGGACGAATGTAATGAAATTTATATGATAGCATATTTGAATAGAGGTGACGTTCAAGAGGCACTTCATGCGAATGTGACAAAAGTGAACTACGAGTGGTCACCTTGTAGTGATGTGATTCAATACTGGCATGATAGCGCATCAACCACTCTTCCCCTCTTACGTCAAATAATGGACCATGGAATTAGGGTTTGGGTTTTCAGTGGAGATACGGATGGAAGAGTGCCCGTTACTTCAACACAATACTCTCTAGACGCTATGAATTTGCAGATCAACACTACATGGCATCCTTGGTACTTAAATGGACAGGTTGCAGGCTACACACAAGTGTACAAGGGAGACTTAACATTTGCCACAGTGAGGGGTGCAGGGCATCAAGTGCCAAGCTACCAGGCCGCAAGATCACTTTCTTTGTTCAAACACTTCTTAGATGGCACTCCTCTTCCTGATTCCACTCTATATTAA 1542 0.4105 MTFCKQSHHRRFLLPSLFIILLSVSDLASGFHGNQQAKAQDKFRKLKYSSGQNVNNNNNKIPTIDKSLFEAEEIDIEAHVYEQEGLKEKDRIEKLPGQPPARFSQYGGYVTVNEEAGRAFYYYFTKAFEDQQNLPLVLWLNGGPGCSSLGYGAMQELGPFRVNSDGKTLFKNRYSWNYVANVLFLESPAGVGFSYSNKTSDYNNNGDQSTASENYIFLLNWLERFPEYKNRDFYITGESYAGHYVPQLAQTILLHNIKSNKTIINLKGILIGNAAINDETDDKGMCDFLESHAIMSESTSLMINKFCDFSPNATDQSQQCNQALGQLDRDSYYIDIYNIYAPLCLNPNLTATPKPTSVVMDECNEIYMIAYLNRGDVQEALHANVTKVNYEWSPCSDVIQYWHDSASTTLPLLRQIMDHGIRVWVFSGDTDGRVPVTSTQYSLDAMNLQINTTWHPWYLNGQVAGYTQVYKGDLTFATVRGAGHQVPSYQAARSLSLFKHFLDGTPLPDSTLY 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco08g2003 513 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 91 490 IPR001563 GO:0004185|GO:0006508
Acco08g2003 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 474 487 IPR001563 GO:0004185|GO:0006508
Acco08g2003 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 185 195 IPR001563 GO:0004185|GO:0006508
Acco08g2003 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 221 246 IPR001563 GO:0004185|GO:0006508
Acco08g2003 513 PRINTS Carboxypeptidase C serine protease (S10) family signature 172 184 IPR001563 GO:0004185|GO:0006508
Acco08g2003 513 Gene3D - 409 504 - -
Acco08g2003 513 Gene3D - 363 400 - -
Acco08g2003 513 Gene3D alpha/beta hydrolase 86 346 IPR029058 -
Acco08g2003 513 FunFam Carboxypeptidase 86 346 - -
Acco08g2003 513 ProSitePatterns Serine carboxypeptidases, histidine active site. 474 491 IPR033124 GO:0004185
Acco08g2003 513 FunFam Carboxypeptidase 409 504 - -
Acco08g2003 513 Pfam Serine carboxypeptidase 97 504 IPR001563 GO:0004185|GO:0006508
Acco08g2003 513 SUPERFAMILY alpha/beta-Hydrolases 93 508 IPR029058 -
Acco08g2003 513 ProSitePatterns Serine carboxypeptidases, serine active site. 235 242 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco08g2003 Acco-ChrAcco08 34279705 34285456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco08g2003 371 507 Calmodulin-binding Proteins AT2G22960 32.847 1.87e-19 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco08g2003 08 34279705 34285456 Acco08g2003 08 34279705 34285456 ECH